HHsearch alignment for GI: 254780829 and conserved domain: PRK06872
>PRK06872 DNA polymerase III subunits gamma and tau; Provisional.
Probab=97.87 E-value=3e-05 Score=53.48 Aligned_cols=48 Identities=29% Similarity=0.441 Sum_probs=40.3
Q ss_pred CEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCC
Q ss_conf 3048689999999999877886408644446656686699679888689999999997078
Q gi|254780829|r 19 YIIGQQDAKRAVAIALRNRWRRQQLPADLRDELMPKNILLVGPTGVGKTAISRRLARLAGA 79 (437)
Q Consensus 19 ~VvGQ~~AKk~lavav~nhy~R~~~~~~~~~e~~psNiLLiGPtGtGKTlLAktLA~~l~V 79 (437)
T Consensus 17 ~~vgq~~v~~~l~~a~~~----------~---r~~haylf~g~rg~gktt~ari~ak~lnc 64 (696)
T PRK06872 17 EVVGQEHILTALSNGLKE----------N---RLHHAYLFSGTRGVGKTSIARLFAKGLNC 64 (696)
T ss_pred HHCCCHHHHHHHHHHHHC----------C---CCCCEEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 523859999999999971----------9---86304751178988888999999998678