HHsearch alignment for GI: 254780829 and conserved domain: PRK08181

>PRK08181 transposase; Validated.
Probab=98.18  E-value=1.5e-06  Score=61.92  Aligned_cols=41  Identities=24%  Similarity=0.387  Sum_probs=29.2

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHH---CCCEEEEECCCEEEC
Q ss_conf             66866996798886899999999970---787797143410121
Q gi|254780829|r   52 MPKNILLVGPTGVGKTAISRRLARLA---GAPFIKVEVTKFTEI   92 (437)
Q Consensus        52 ~psNiLLiGPtGtGKTlLAktLA~~l---~VPF~~~daT~ftE~   92 (437)
T Consensus       105 ~~~Nvil~Gp~GtGKThLA~Alg~~A~~~G~~V~f~~~~~L~~~  148 (269)
T PRK08181        105 KGANLLLFGPPGGGKSHLAAAIGLALIENGWRVLFTRTTDLVQK  148 (269)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHH
T ss_conf             48708998999987889999999999987993999789999999