HHsearch alignment for GI: 254780829 and conserved domain: PRK09111
>PRK09111 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.74 E-value=6.6e-05 Score=51.22 Aligned_cols=118 Identities=20% Similarity=0.189 Sum_probs=69.1
Q ss_pred CEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCC------------EEEE-E
Q ss_conf 30486899999999998778864086444466566866996798886899999999970787------------7971-4
Q gi|254780829|r 19 YIIGQQDAKRAVAIALRNRWRRQQLPADLRDELMPKNILLVGPTGVGKTAISRRLARLAGAP------------FIKV-E 85 (437)
Q Consensus 19 ~VvGQ~~AKk~lavav~nhy~R~~~~~~~~~e~~psNiLLiGPtGtGKTlLAktLA~~l~VP------------F~~~-d 85 (437)
T Consensus 24 ~~~gq~~~~~~l~~~~~----~~---------~~~~a~l~~g~rg~gktt~ari~a~~lnc~~~~~~~~~~~~~c~~c~~ 90 (600)
T PRK09111 24 DLIGQEAMVRTLRNAFE----TG---------RIAQAFMLTGVRGVGKTTTARILARALNYKGPDGVGGPTIDPCGVGEH 90 (600)
T ss_pred HHCCCHHHHHHHHHHHH----CC---------CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
T ss_conf 63385999999999997----29---------842047645789878999999999996698876668998898998865
Q ss_pred CCC--------EEE---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf 341--------012---122343101346788876521278998565498888688875555311432110046689889
Q gi|254780829|r 86 VTK--------FTE---IGYVGRNVEQIIRDLVDVAINIVRESRRDEVREQASINAEERILDALVGKTATSNTREVFRKK 154 (437)
Q Consensus 86 aT~--------ftE---~gyvG~DVes~i~~l~~~a~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (437)
T Consensus 91 c~~i~~~~~~d~~e~daas~~--~v~~~r-~~~~~~~~~p~~~~~kv~iid---e----------vhmls~~afnallkt 154 (600)
T PRK09111 91 CQAIMEGRHVDVIEMDAASHT--GVDDIR-EIIESVRYRPVSARYKVYIID---E----------VHMLSTAAFNALLKT 154 (600)
T ss_pred HHHHHCCCCCCEEEEECCCCC--CHHHHH-HHHHHHCCCCCCCCEEEEEEE---C----------CCCCCHHHHHHHHHH
T ss_conf 898866899875885155457--888999-999860538877754699960---0----------110579999999987
Q ss_pred HHHCCCCCCEE
Q ss_conf 86168888549
Q gi|254780829|r 155 LRDGEISDKEI 165 (437)
Q Consensus 155 l~~~~~~~~~i 165 (437)
T Consensus 155 leepp~~~~fi 165 (600)
T PRK09111 155 LEEPPPHVKFI 165 (600)
T ss_pred HHCCCCCEEEE
T ss_conf 62598654999