HHsearch alignment for GI: 254780829 and conserved domain: PRK09473
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional.
Probab=96.48 E-value=0.02 Score=35.11 Aligned_cols=41 Identities=24% Similarity=0.356 Sum_probs=27.9
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCHHH
Q ss_conf 6996798886899999999970787797143410121223431013
Q gi|254780829|r 56 ILLVGPTGVGKTAISRRLARLAGAPFIKVEVTKFTEIGYVGRNVEQ 101 (437)
Q Consensus 56 iLLiGPtGtGKTlLAktLA~~l~VPF~~~daT~ftE~gyvG~DVes 101 (437)
T Consensus 45 lgivGeSGsGKSTl~~~i~gll~~~~-~~sG----~I~~~G~~i~~ 85 (330)
T PRK09473 45 LGIVGESGSGKSQTAFALMGLLAANG-RIGG----SATFNGREILN 85 (330)
T ss_pred EEEECCCCCHHHHHHHHHHCCCCCCC-CEEE----EEEECCEECCC
T ss_conf 99986898779999999976888888-3358----99999998665