HHsearch alignment for GI: 254780829 and conserved domain: PRK10787

Probab=99.33  E-value=1.6e-10  Score=87.61  Aligned_cols=94  Identities=22%  Similarity=0.451  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHCEECHHHHHHHHH--HHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEC
Q ss_conf             89999986203048689999999--9998778864086444466566866996798886899999999970787797143
Q gi|254780829|r    9 PREIVSELDRYIIGQQDAKRAVA--IALRNRWRRQQLPADLRDELMPKNILLVGPTGVGKTAISRRLARLAGAPFIKVEV   86 (437)
Q Consensus         9 P~~i~~~Ld~~VvGQ~~AKk~la--vav~nhy~R~~~~~~~~~e~~psNiLLiGPtGtGKTlLAktLA~~l~VPF~~~da   86 (437)
T Consensus       313 l~~A~~iLd~dHyGL~~vKeRile~lAv~------~~~~~~k----g~IlclvGpPGvGKTSl~~sIA~al~r~f~risl  382 (784)
T PRK10787        313 LRQAQEILDTDHYGLERVKDRILEYLAVQ------SRVNKIK----GPILCLVGPPGVGKTSLGQSIAKATGRKYVRMAL  382 (784)
T ss_pred             HHHHHHHHHHHHCCHHHHHHHHHHHHHHH------HHCCCCC----CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEC
T ss_conf             99999987654306577999999999999------8624677----8779964699877246999999985898699806


Q ss_pred             CCEEE--------CCCCCCCHHHHHHHHHHHHHH
Q ss_conf             41012--------122343101346788876521
Q gi|254780829|r   87 TKFTE--------IGYVGRNVEQIIRDLVDVAIN  112 (437)
Q Consensus        87 T~ftE--------~gyvG~DVes~i~~l~~~a~~  112 (437)
T Consensus       383 GGv~DeaeirGHrrTYvgampGrii~~l~~a~~~  416 (784)
T PRK10787        383 GGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVK  416 (784)
T ss_pred             CCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf             8878888825643343443683899999974898