HHsearch alignment for GI: 254780829 and conserved domain: PRK12323
>PRK12323 DNA polymerase III subunits gamma and tau; Provisional.
Probab=98.57 E-value=3.5e-07 Score=65.95 Aligned_cols=48 Identities=35% Similarity=0.548 Sum_probs=40.6
Q ss_pred CEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCC
Q ss_conf 3048689999999999877886408644446656686699679888689999999997078
Q gi|254780829|r 19 YIIGQQDAKRAVAIALRNRWRRQQLPADLRDELMPKNILLVGPTGVGKTAISRRLARLAGA 79 (437)
Q Consensus 19 ~VvGQ~~AKk~lavav~nhy~R~~~~~~~~~e~~psNiLLiGPtGtGKTlLAktLA~~l~V 79 (437)
T Consensus 17 ~~vGQ~~v~~~l~na~~~-------------~r~~haylf~G~rGvGKTt~ari~Ak~lnc 64 (721)
T PRK12323 17 TLVGQEHVVRALTHALEQ-------------QRLHHAYLFTGTRGVGKTTLSRILAKSLNC 64 (721)
T ss_pred HHCCCHHHHHHHHHHHHC-------------CCCCCEEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 532859999999999971-------------997544750279988898999999999768