HHsearch alignment for GI: 254780829 and conserved domain: PRK13833

>PRK13833 conjugal transfer protein TrbB; Provisional.
Probab=96.85  E-value=0.001  Score=43.46  Aligned_cols=26  Identities=31%  Similarity=0.429  Sum_probs=23.6

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             66866996798886899999999970
Q gi|254780829|r   52 MPKNILLVGPTGVGKTAISRRLARLA   77 (437)
Q Consensus        52 ~psNiLLiGPtGtGKTlLAktLA~~l   77 (437)
T Consensus       143 ~r~nilVsGgTGSGKTTllnaL~~~i  168 (323)
T PRK13833        143 SRLNIVISGGTGSGKTTLANAVIAEI  168 (323)
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHH
T ss_conf             18968999177775689999999864