HHsearch alignment for GI: 254780829 and conserved domain: TIGR02858

>TIGR02858 spore_III_AA stage III sporulation protein AA; InterPro: IPR014217 Proteins in this entry include the stage III sporulation protein AA that is encoded by one of several genes in the spoIIIA locus. This protein is only found in species that are capable of endospore formation..

Probab=95.27  E-value=0.011  Score=36.74  Aligned_cols=41  Identities=34%  Similarity=0.568  Sum_probs=30.5

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCHH
Q ss_conf             6686699679888689999999997078779714341012122343101
Q gi|254780829|r   52 MPKNILLVGPTGVGKTAISRRLARLAGAPFIKVEVTKFTEIGYVGRNVE  100 (437)
Q Consensus        52 ~psNiLLiGPtGtGKTlLAktLA~~l~VPF~~~daT~ftE~gyvG~DVe  100 (437)
T Consensus       122 ~~~NTLiIsPPq~GKTTlLRDlaR~~--------StG~~~~~~~g~KVg  162 (282)
T TIGR02858       122 RVLNTLIISPPQCGKTTLLRDLARIL--------STGISKLGLKGKKVG  162 (282)
T ss_pred             CEEEEEEECCCCCCCCCHHHHHHHHH--------HCCCCCCCCCCCCEE
T ss_conf             44678888688988510488898886--------078542468997469