HHsearch alignment for GI: 254780829 and conserved domain: TIGR03345
>TIGR03345 VI_ClpV1 type VI secretion ATPase, ClpV1 family. Members of this protein family are homologs of ClpB, an ATPase associated with chaperone-related functions. These ClpB homologs, designated ClpV1, are a key component of the bacterial pathogenicity-associated type VI secretion system.
Probab=97.49 E-value=9.8e-05 Score=50.09 Aligned_cols=33 Identities=36% Similarity=0.406 Sum_probs=27.8
Q ss_pred CCCCEEEECCCCCCHHHHHHHHHHHH---CCCEEEE
Q ss_conf 66866996798886899999999970---7877971
Q gi|254780829|r 52 MPKNILLVGPTGVGKTAISRRLARLA---GAPFIKV 84 (437)
Q Consensus 52 ~psNiLLiGPtGtGKTlLAktLA~~l---~VPF~~~ 84 (437)
T Consensus 207 ~KNNPiLVGepGVGKTAIvEGLA~rI~~g~VP~~L~ 242 (852)
T TIGR03345 207 RQNNPILTGEAGVGKTAVVEGLALRIAAGDVPPALR 242 (852)
T ss_pred CCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 479974657999879999999999997699986774