HHsearch alignment for GI: 254780829 and conserved domain: cd00046

>cd00046 DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.

Probab=95.51  E-value=0.0085  Score=37.53  Aligned_cols=19  Identities=42%  Similarity=0.690  Sum_probs=16.0

Q ss_pred             CCEEEECCCCCCHHHHHHH
Q ss_conf             8669967988868999999
Q gi|254780829|r   54 KNILLVGPTGVGKTAISRR   72 (437)
Q Consensus        54 sNiLLiGPtGtGKTlLAkt   72 (437)
T Consensus         1 ~~~lv~~ptGsGKT~~~~~   19 (144)
T cd00046           1 RDVLLAAPTGSGKTLAALL   19 (144)
T ss_pred             CCEEEECCCCCHHHHHHHH
T ss_conf             9999988997179999999