>cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=95.57  E-value=0.0098  Score=37.14  Aligned_cols=24  Identities=42%  Similarity=0.686  Sum_probs=21.9

Q ss_pred             CEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf             669967988868999999999707
Q gi|254780829|r   55 NILLVGPTGVGKTAISRRLARLAG   78 (437)
Q Consensus        55 NiLLiGPtGtGKTlLAktLA~~l~   78 (437)
T Consensus        27 ~~~i~G~nGaGKSTLl~~l~gl~~   50 (157)
T cd00267          27 IVALVGPNGSGKSTLLRAIAGLLK   50 (157)
T ss_pred             EEEEECCCCCCHHHHHHHHHCCCC
T ss_conf             999987889998999999958847