HHsearch alignment for GI: 254780829 and conserved domain: cd01120
>cd01120 RecA-like_NTPases RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H+ATPases, DnaB and related helicases as well as bacterial RecA and related eukaryotic and archaeal recombinases. This group also includes bacterial conjugation proteins and related DNA transfer proteins involved in type II and type IV secretion.
Probab=95.79 E-value=0.017 Score=35.63 Aligned_cols=32 Identities=41% Similarity=0.651 Sum_probs=23.8
Q ss_pred CEEEECCCCCCHHHHHHHHHHHH---CCCEEEEEC
Q ss_conf 66996798886899999999970---787797143
Q gi|254780829|r 55 NILLVGPTGVGKTAISRRLARLA---GAPFIKVEV 86 (437)
Q Consensus 55 NiLLiGPtGtGKTlLAktLA~~l---~VPF~~~da 86 (437)
T Consensus 1 ~~li~g~~g~GKttl~~~~~~~~~~~~~~~~~~~~ 35 (165)
T cd01120 1 LILVFGPTGSGKTTLALQLALNIATKGGKVVYVDI 35 (165)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 98999899998999999999998763997999986