HHsearch alignment for GI: 254780829 and conserved domain: cd03256
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.81 E-value=0.0062 Score=38.41 Aligned_cols=29 Identities=34% Similarity=0.652 Sum_probs=23.3
Q ss_pred CCCCC-CEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf 65668-669967988868999999999707
Q gi|254780829|r 50 ELMPK-NILLVGPTGVGKTAISRRLARLAG 78 (437)
Q Consensus 50 e~~ps-NiLLiGPtGtGKTlLAktLA~~l~ 78 (437)
T Consensus 23 ~i~~Ge~~~iiGpsGsGKSTLl~~i~gl~~ 52 (241)
T cd03256 23 SINPGEFVALIGPSGAGKSTLLRCLNGLVE 52 (241)
T ss_pred EECCCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 999998999999998339999999974999