HHsearch alignment for GI: 254780829 and conserved domain: pfam00004

>pfam00004 AAA ATPase family associated with various cellular activities (AAA). AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes.

Probab=99.30  E-value=6.2e-12  Score=96.76  Aligned_cols=114  Identities=22%  Similarity=0.313  Sum_probs=69.3

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             69967988868999999999707877971434101212234310134678887652127899856549888868887555
Q gi|254780829|r   56 ILLVGPTGVGKTAISRRLARLAGAPFIKVEVTKFTEIGYVGRNVEQIIRDLVDVAINIVRESRRDEVREQASINAEERIL  135 (437)
Q Consensus        56 iLLiGPtGtGKTlLAktLA~~l~VPF~~~daT~ftE~gyvG~DVes~i~~l~~~a~~~~~~a~~~i~~~~~~~~~~~~~~  135 (437)
T Consensus         1 iLl~GppGtGKT~~a~~la~~~~~~~~~v~~~~~~~-~~~g~~~~----~i~~~f~~a~~~~p~Il~iDe~d~l~~~~~~   75 (131)
T pfam00004         1 LLLYGPPGTGKTTLAKAVAKELGAPFIEISGSELVS-KYVGESEK----RLRELFEAAKKLAPCVIFIDEIDALAGSRGS   75 (131)
T ss_pred             CEEECCCCCCHHHHHHHHHHHHCCCCEECCCCCCCC-CCCCHHHH----HHHHHHHHHHHCCCCEEEECHHHHHHCCCCC
T ss_conf             987899999999999999999789853324201222-33450688----8999999999749918983116777516788


Q ss_pred             HHHCCCCCCCHHHHHHHHHHHHCCCCCC-EEEEEECCCCCCCC
Q ss_conf             5311432110046689889861688885-49987535545544
Q gi|254780829|r  136 DALVGKTATSNTREVFRKKLRDGEISDK-EIDIEVADTSSDIS  177 (437)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~i~i~~~~~~~~~~  177 (437)
T Consensus        76 ~---~~~~~~~~~~~ll~~ld~~~~~~~~v~~I~tTN~~~~ld  115 (131)
T pfam00004        76 G---GDSESRRVVNQLLTELDGFTSSLSKVIVIAATNRPDKLD  115 (131)
T ss_pred             C---CCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHCC
T ss_conf             8---887513268789999850224688769999759904499