HHsearch alignment for GI: 254780829 and conserved domain: pfam00493
>pfam00493 MCM MCM2/3/5 family.
Probab=97.30 E-value=0.00047 Score=45.69 Aligned_cols=77 Identities=25% Similarity=0.376 Sum_probs=51.0
Q ss_pred HHHHHHCEECHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCEEE
Q ss_conf 998620304868999999999987788640864-4446656686699679888689999999997078779714341012
Q gi|254780829|r 13 VSELDRYIIGQQDAKRAVAIALRNRWRRQQLPA-DLRDELMPKNILLVGPTGVGKTAISRRLARLAGAPFIKVEVTKFTE 91 (437)
Q Consensus 13 ~~~Ld~~VvGQ~~AKk~lavav~nhy~R~~~~~-~~~~e~~psNiLLiGPtGtGKTlLAktLA~~l~VPF~~~daT~ftE 91 (437)
T Consensus 19 ~~siaP~i~G~~~vK~ai~l~l~gg~~~~~~~~~~~Rg~---ihiLLvGdPG~gKSqlLk~~~~~~pr-~~~tsg~~ss~ 94 (327)
T pfam00493 19 ARSIAPSIYGHEDVKKAILLQLFGGVKKNLPDGTRLRGD---INVLLVGDPGTAKSQLLKYVAKLAPR-AVYTSGKGSSA 94 (327)
T ss_pred HHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC---CEEEEECCCCCCHHHHHHHHHHHCCC-CEEECCCCCCC
T ss_conf 998597124987999999999808987658888620365---11898469981560999999986887-08831776656
Q ss_pred CC
Q ss_conf 12
Q gi|254780829|r 92 IG 93 (437)
Q Consensus 92 ~g 93 (437)
T Consensus 95 ~G 96 (327)
T pfam00493 95 AG 96 (327)
T ss_pred CC
T ss_conf 77