HHsearch alignment for GI: 254780829 and conserved domain: pfam00493

>pfam00493 MCM MCM2/3/5 family.
Probab=97.30  E-value=0.00047  Score=45.69  Aligned_cols=77  Identities=25%  Similarity=0.376  Sum_probs=51.0

Q ss_pred             HHHHHHCEECHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCEEE
Q ss_conf             998620304868999999999987788640864-4446656686699679888689999999997078779714341012
Q gi|254780829|r   13 VSELDRYIIGQQDAKRAVAIALRNRWRRQQLPA-DLRDELMPKNILLVGPTGVGKTAISRRLARLAGAPFIKVEVTKFTE   91 (437)
Q Consensus        13 ~~~Ld~~VvGQ~~AKk~lavav~nhy~R~~~~~-~~~~e~~psNiLLiGPtGtGKTlLAktLA~~l~VPF~~~daT~ftE   91 (437)
T Consensus        19 ~~siaP~i~G~~~vK~ai~l~l~gg~~~~~~~~~~~Rg~---ihiLLvGdPG~gKSqlLk~~~~~~pr-~~~tsg~~ss~   94 (327)
T pfam00493        19 ARSIAPSIYGHEDVKKAILLQLFGGVKKNLPDGTRLRGD---INVLLVGDPGTAKSQLLKYVAKLAPR-AVYTSGKGSSA   94 (327)
T ss_pred             HHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC---CEEEEECCCCCCHHHHHHHHHHHCCC-CEEECCCCCCC
T ss_conf             998597124987999999999808987658888620365---11898469981560999999986887-08831776656


Q ss_pred             CC
Q ss_conf             12
Q gi|254780829|r   92 IG   93 (437)
Q Consensus        92 ~g   93 (437)
T Consensus        95 ~G   96 (327)
T pfam00493        95 AG   96 (327)
T ss_pred             CC
T ss_conf             77