HHsearch alignment for GI: 254780829 and conserved domain: pfam00519
>pfam00519 PPV_E1_C Papillomavirus helicase. This protein is a DNA helicase that is required for initiation of viral DNA replication. This protein forms a complex with the E2 protein pfam00508.
Probab=96.01 E-value=0.013 Score=36.30 Aligned_cols=30 Identities=27% Similarity=0.562 Sum_probs=25.7
Q ss_pred CCCCC-EEEECCCCCCHHHHHHHHHHHHCCC
Q ss_conf 56686-6996798886899999999970787
Q gi|254780829|r 51 LMPKN-ILLVGPTGVGKTAISRRLARLAGAP 80 (437)
Q Consensus 51 ~~psN-iLLiGPtGtGKTlLAktLA~~l~VP 80 (437)
T Consensus 259 ~PKknCivi~GPPnTGKS~F~mSLi~fL~G~ 289 (432)
T pfam00519 259 IPKKNCLVIYGPPDTGKSMFCMSLIKFLGGK 289 (432)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHCCE
T ss_conf 9852469998999966768999999984986