HHsearch alignment for GI: 254780829 and conserved domain: pfam05729
>pfam05729 NACHT NACHT domain. This NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation. This family is closely related to pfam00931.
Probab=95.88 E-value=0.0068 Score=38.15 Aligned_cols=37 Identities=27% Similarity=0.445 Sum_probs=25.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHH-------CCCE-EEEECCCEEEC
Q ss_conf 6996798886899999999970-------7877-97143410121
Q gi|254780829|r 56 ILLVGPTGVGKTAISRRLARLA-------GAPF-IKVEVTKFTEI 92 (437)
Q Consensus 56 iLLiGPtGtGKTlLAktLA~~l-------~VPF-~~~daT~ftE~ 92 (437)
T Consensus 3 i~i~G~aG~GKTtll~kl~~~wa~g~~~~~~~~vf~~~~r~~~~~ 47 (165)
T pfam05729 3 VILQGEAGSGKTTLLQKLALLWAQGKLPQDFDFVFFLPCRELSRS 47 (165)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHCCC
T ss_conf 999827989899999999999986984369728999995670777