HHsearch alignment for GI: 254780829 and conserved domain: pfam05729

>pfam05729 NACHT NACHT domain. This NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation. This family is closely related to pfam00931.
Probab=95.88  E-value=0.0068  Score=38.15  Aligned_cols=37  Identities=27%  Similarity=0.445  Sum_probs=25.8

Q ss_pred             EEEECCCCCCHHHHHHHHHHHH-------CCCE-EEEECCCEEEC
Q ss_conf             6996798886899999999970-------7877-97143410121
Q gi|254780829|r   56 ILLVGPTGVGKTAISRRLARLA-------GAPF-IKVEVTKFTEI   92 (437)
Q Consensus        56 iLLiGPtGtGKTlLAktLA~~l-------~VPF-~~~daT~ftE~   92 (437)
T Consensus         3 i~i~G~aG~GKTtll~kl~~~wa~g~~~~~~~~vf~~~~r~~~~~   47 (165)
T pfam05729         3 VILQGEAGSGKTTLLQKLALLWAQGKLPQDFDFVFFLPCRELSRS   47 (165)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHCCC
T ss_conf             999827989899999999999986984369728999995670777