HHsearch alignment for GI: 254780829 and conserved domain: pfam07728

>pfam07728 AAA_5 AAA domain (dynein-related subfamily). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.

Probab=98.45  E-value=1.3e-07  Score=68.79  Aligned_cols=38  Identities=39%  Similarity=0.642  Sum_probs=33.9

Q ss_pred             CEEEECCCCCCHHHHHHHHHHHH-CCCEEEEECCCEEEC
Q ss_conf             66996798886899999999970-787797143410121
Q gi|254780829|r   55 NILLVGPTGVGKTAISRRLARLA-GAPFIKVEVTKFTEI   92 (437)
Q Consensus        55 NiLLiGPtGtGKTlLAktLA~~l-~VPF~~~daT~ftE~   92 (437)
T Consensus         1 ~vll~Gp~G~GKT~la~~la~~l~~~~~~~i~~~~~~~~   39 (139)
T pfam07728         1 GVLLVGPPGTGKSELAERLAAALSNRPVFYVQLTRDTTE   39 (139)
T ss_pred             CEEEECCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCH
T ss_conf             989998997569999999999807983111214655652