HHsearch alignment for GI: 254780829 and conserved domain: pfam08298
>pfam08298 AAA_PrkA PrkA AAA domain. This is a family of PrkA bacterial and archaeal serine kinases approximately 630 residues long. This is the N-terminal AAA domain.
Probab=95.62 E-value=0.032 Score=33.80 Aligned_cols=64 Identities=23% Similarity=0.368 Sum_probs=40.7
Q ss_pred EECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHH-CCCEEEEECCCEEE
Q ss_conf 0486899999999998778864086444466566866996798886899999999970-78779714341012
Q gi|254780829|r 20 IIGQQDAKRAVAIALRNRWRRQQLPADLRDELMPKNILLVGPTGVGKTAISRRLARLA-GAPFIKVEVTKFTE 91 (437)
Q Consensus 20 VvGQ~~AKk~lavav~nhy~R~~~~~~~~~e~~psNiLLiGPtGtGKTlLAktLA~~l-~VPF~~~daT~ftE 91 (437)
T Consensus 60 ffGme~~i~~iV~~~----ks----AA~g~e~~kqIllL~GPVGsGKSsl~e~LK~glE~y~~Y~i~gsPm~e 124 (358)
T pfam08298 60 FFGMEETIERIVNYF----RH----AAQGLEERKQILYLLGPVGGGKSSLAERLKKLLELVPIYALKGSPVFE 124 (358)
T ss_pred CCCHHHHHHHHHHHH----HH----HHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf 001599999999999----99----972367210589997789877589999999872058648844897778