HHsearch alignment for GI: 254780829 and conserved domain: smart00382

>smart00382 AAA ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.

Probab=97.96  E-value=6.8e-06  Score=57.62  Aligned_cols=40  Identities=43%  Similarity=0.663  Sum_probs=34.0

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHHHHCCC---EEEEECCCEEEC
Q ss_conf             6866996798886899999999970787---797143410121
Q gi|254780829|r   53 PKNILLVGPTGVGKTAISRRLARLAGAP---FIKVEVTKFTEI   92 (437)
Q Consensus        53 psNiLLiGPtGtGKTlLAktLA~~l~VP---F~~~daT~ftE~   92 (437)
T Consensus         2 ~~~ill~G~~GsGKTtl~~~la~~~~~~~~~v~~~~~~~~~~~   44 (148)
T smart00382        2 GEVILIVGPPGSGKTTLARALARELGPPGGGVIYIDGEDILEE   44 (148)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHH
T ss_conf             9789999999702999999999872668996899875998988