RPSBLAST alignment for GI: 254780829 and conserved domain: pfam07724

>gnl|CDD|116338 pfam07724, AAA_2, AAA domain (Cdc48 subfamily). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model. Length = 168

 Score = 83.0 bits (206), Expect = 2e-16
 Identities = 40/187 (21%), Positives = 65/187 (34%), Gaps = 60/187 (32%)

Query: 176 ISNFDIPGGASVGILNLSELFSKVMGSGRKKKIR--MSVQKCYPELMRDESDRLIDMDTV 233
           I +F   G   VG   L++  ++++    +  IR  MS      E M    +  +     
Sbjct: 3   IGSFLFLGPTGVGKTELAKALAELLFGDERALIRIDMS------EYM---EEHSVSRLIG 53

Query: 234 HRDSIQMVEN------------YGIVFLDEFDKIVARDSGNGIGVSREGVQRDLLPLVEG 281
                   E             Y IV +DE +K               GVQ DLL ++EG
Sbjct: 54  APPGYVGYEEGGQLTEAVRRKPYSIVLIDEIEKAHP------------GVQNDLLQILEG 101

Query: 282 SSVSTKYGS-INTDHILFIASGAFHVSRPAD------------------------LLPEI 316
            +++ K G  ++  + LFI +G F   + +D                         +PE 
Sbjct: 102 GTLTDKQGRKVDFRNTLFIMTGNFGSEKISDASRLGKSPDYELLKELVMDLLKKGFIPEF 161

Query: 317 QGRFPVR 323
            GR P+ 
Sbjct: 162 LGRLPII 168