HHsearch alignment for GI: 254780831 and conserved domain: COG1419

Probab=97.28  E-value=0.00097  Score=44.92  Aligned_cols=168  Identities=25%  Similarity=0.319  Sum_probs=85.1

Q ss_pred             CCCEECCCCCCCCCHHHHHHHHHHHHC--CCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf             420102446665425789999898723--577506988224678765310002456311233445766322303223334
Q gi|254780831|r   95 KKFVAVASGKGGVGKSTTVVNIACALK--NKGKNVAILDADVYGPSIPKLLKISGKVEISDKKFLKPKENYGIKIMSMAS  172 (341)
Q Consensus        95 ~~iiav~SgKGGVGKSt~s~nLa~ala--~~G~~V~liDaDi~~ps~~~~lg~~~~~~~~~~~~i~p~~~~gi~~~s~g~  172 (341)
T Consensus       203 ~~vi~LV-GPTGVGKTTTlAKLAar~~~~~~~~kVaiITtDtYRI------GA~EQLk~Ya~im~vp~~-----v-----  265 (407)
T COG1419         203 KRVIALV-GPTGVGKTTTLAKLAARYVMLKKKKKVAIITTDTYRI------GAVEQLKTYADIMGVPLE-----V-----  265 (407)
T ss_pred             CCEEEEE-CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHH------HHHHHHHHHHHHHCCCEE-----E-----
T ss_conf             8579998-9988758879999999997532576068997144115------289999999998699559-----9-----


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCC--CCCC-----HHHHCCCCCCE-EEEECCCCCHHHHH
Q ss_conf             3552210001342024789998675213777589974556444--2100-----00000223402-67421443113456
Q gi|254780831|r  173 LVDENVAMIWRGPMVQSAIMHMLHNVVWGQLDFLLIDMPPGTG--DAHL-----TIAQKIPLSGV-VIVSTPQDLALIDV  244 (341)
Q Consensus       173 l~~~~~~~~~rg~~~~~~l~~~l~~~~w~~~D~liiD~ppG~g--d~~l-----sl~~~~~~~~~-iiVttP~~~s~~da  244 (341)
T Consensus       266 -v~~~~-------el~~ai~~l------~~~d~ILVDTa-Grs~~D~~~i~el~~~~~~~~~i~~~Lvlsa--t~K~~dl  328 (407)
T COG1419         266 -VYSPK-------ELAEAIEAL------RDCDVILVDTA-GRSQYDKEKIEELKELIDVSHSIEVYLVLSA--TTKYEDL  328 (407)
T ss_pred             -ECCHH-------HHHHHHHHH------HCCCEEEEECC-CCCCCCHHHHHHHHHHHHCCCCCEEEEEEEC--CCCHHHH
T ss_conf             -63999-------999999985------31888999689-9883378999999999703566217999845--7646889


Q ss_pred             HHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEE----EE-CCCCHHHHH
Q ss_conf             66777640012211445544202458778866512477658999998479789----88-279989997
Q gi|254780831|r  245 KRAISMYQKMNIPIIGMIENMSYFLASDTGKKYDLFGNGGARFEAEKIGIPFL----ES-VPFDMDVRV  308 (341)
Q Consensus       245 ~r~~~~~~~~~~~i~GiV~NMs~~~~~~~~~~~~~fg~~~~~~~a~~~~i~~l----g~-IP~d~~i~~  308 (341)
T Consensus       329 kei~~~f~~~~--i~~~I~T-------KlDET~s~---G~~~s~~~e~~~PV~YvT~GQ~VPeDI~va~  385 (407)
T COG1419         329 KEIIKQFSLFP--IDGLIFT-------KLDETTSL---GNLFSLMYETRLPVSYVTNGQRVPEDIVVAN  385 (407)
T ss_pred             HHHHHHHCCCC--CCEEEEE-------CCCCCCCH---HHHHHHHHHHCCCEEEEECCCCCCCHHHHCC
T ss_conf             99999724588--6616897-------13356763---3899999996897499717987870355358