HHsearch alignment for GI: 254780831 and conserved domain: COG1492
>COG1492 CobQ Cobyric acid synthase [Coenzyme metabolism].
Probab=94.97 E-value=0.041 Score=34.06 Aligned_cols=196 Identities=19% Similarity=0.289 Sum_probs=90.8
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCE-------ECCCC---------CCCCCCCC-CCCCC
Q ss_conf 102446665425789999898723577506988224678765310-------00245---------63112334-45766
Q gi|254780831|r 98 VAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSIPKL-------LKISG---------KVEISDKK-FLKPK 160 (341)
Q Consensus 98 iav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps~~~~-------lg~~~---------~~~~~~~~-~i~p~ 160 (341)
T Consensus 7 ~GT~S~---~GKS~~~aglcRi~~~~G~~V~PFK~QN--MsLNs~it~~G~EIgraQ~~QA~Aa~i~p~v~mNPvLLKP~ 81 (486)
T COG1492 7 QGTTSD---AGKSFLVAGLCRILARRGYRVAPFKSQN--MSLNSAITPGGGEIGRAQALQALAAGIEPSVHMNPVLLKPC 81 (486)
T ss_pred EECCCC---CCHHHHHHHHHHHHHHCCCCCCCCHHHH--CCCCCEECCCCCEEEHHHHHHHHHCCCCCCCCCCCEEEEEC
T ss_conf 721477---6546752453488873577547870654--34660787799687550667898739987434287787035
Q ss_pred CCCCEEECCCCCCCCCCCCC-CCCC--CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC--------HHHHCCCCCC
Q ss_conf 32230322333435522100-0134--20247899986752137775899745564442100--------0000022340
Q gi|254780831|r 161 ENYGIKIMSMASLVDENVAM-IWRG--PMVQSAIMHMLHNVVWGQLDFLLIDMPPGTGDAHL--------TIAQKIPLSG 229 (341)
Q Consensus 161 ~~~gi~~~s~g~l~~~~~~~-~~rg--~~~~~~l~~~l~~~~w~~~D~liiD~ppG~gd~~l--------sl~~~~~~~~ 229 (341)
T Consensus 82 sd~~sQVIv~G~~~G~~s~~~yy~~~~~~l~~~v~~s~~-~l~~~~d~Vv~EGAGSpaEiNlr~~Di~Nm~~a~~~-dap 159 (486)
T COG1492 82 SDTGSQVIVMGKDIGRKSAVEYYQEGKGLLWVAVKESLE-RLDREYDVVVIEGAGSPAEINLRDRDIANMGVAEIA-DAP 159 (486)
T ss_pred CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHCCCEEEEECCCCHHHCCCCCCCCCCEEEEHHC-CCC
T ss_conf 888447999463446657178899988999999999998-754105589996379823227663661100220233-898
Q ss_pred EEEEECCCCC-HHHHHHHHHHHHH-CCCCCHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEEECCCCHHHH
Q ss_conf 2674214431-1345666777640-0122114455442024587788665124776589999984797898827998999
Q gi|254780831|r 230 VVIVSTPQDL-ALIDVKRAISMYQ-KMNIPIIGMIENMSYFLASDTGKKYDLFGNGGARFEAEKIGIPFLESVPFDMDVR 307 (341)
Q Consensus 230 ~iiVttP~~~-s~~da~r~~~~~~-~~~~~i~GiV~NMs~~~~~~~~~~~~~fg~~~~~~~a~~~~i~~lg~IP~d~~i~ 307 (341)
T Consensus 160 vILV~DIdRGGvfAsl~GT~~lL~~~~r~~VkG~iINk--FR----Gd~-~ll-~~gik~Le~~tg~~vlGv~P~~~~~~ 231 (486)
T COG1492 160 VILVGDIDRGGVFASLYGTLALLPESDRALVKGFIINK--FR----GDE-SLL-DPGLKWLEELTGVPVLGVLPYLKDAL 231 (486)
T ss_pred EEEEEEECCCCEEEEEEEHHEECCHHHHCCEEEEEEEE--EC----CCH-HHH-HHHHHHHHHHHCCEEEEECCCCCCCC
T ss_conf 89999511564541730212236876760014799963--17----987-887-45999999861974675652555455
Q ss_pred H
Q ss_conf 7
Q gi|254780831|r 308 V 308 (341)
Q Consensus 308 ~ 308 (341)
T Consensus 232 ~ 232 (486)
T COG1492 232 R 232 (486)
T ss_pred C
T ss_conf 7