HHsearch alignment for GI: 254780831 and conserved domain: COG1492

>COG1492 CobQ Cobyric acid synthase [Coenzyme metabolism].
Probab=94.97  E-value=0.041  Score=34.06  Aligned_cols=196  Identities=19%  Similarity=0.289  Sum_probs=90.8

Q ss_pred             EECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCE-------ECCCC---------CCCCCCCC-CCCCC
Q ss_conf             102446665425789999898723577506988224678765310-------00245---------63112334-45766
Q gi|254780831|r   98 VAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSIPKL-------LKISG---------KVEISDKK-FLKPK  160 (341)
Q Consensus        98 iav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps~~~~-------lg~~~---------~~~~~~~~-~i~p~  160 (341)
T Consensus         7 ~GT~S~---~GKS~~~aglcRi~~~~G~~V~PFK~QN--MsLNs~it~~G~EIgraQ~~QA~Aa~i~p~v~mNPvLLKP~   81 (486)
T COG1492           7 QGTTSD---AGKSFLVAGLCRILARRGYRVAPFKSQN--MSLNSAITPGGGEIGRAQALQALAAGIEPSVHMNPVLLKPC   81 (486)
T ss_pred             EECCCC---CCHHHHHHHHHHHHHHCCCCCCCCHHHH--CCCCCEECCCCCEEEHHHHHHHHHCCCCCCCCCCCEEEEEC
T ss_conf             721477---6546752453488873577547870654--34660787799687550667898739987434287787035


Q ss_pred             CCCCEEECCCCCCCCCCCCC-CCCC--CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC--------HHHHCCCCCC
Q ss_conf             32230322333435522100-0134--20247899986752137775899745564442100--------0000022340
Q gi|254780831|r  161 ENYGIKIMSMASLVDENVAM-IWRG--PMVQSAIMHMLHNVVWGQLDFLLIDMPPGTGDAHL--------TIAQKIPLSG  229 (341)
Q Consensus       161 ~~~gi~~~s~g~l~~~~~~~-~~rg--~~~~~~l~~~l~~~~w~~~D~liiD~ppG~gd~~l--------sl~~~~~~~~  229 (341)
T Consensus        82 sd~~sQVIv~G~~~G~~s~~~yy~~~~~~l~~~v~~s~~-~l~~~~d~Vv~EGAGSpaEiNlr~~Di~Nm~~a~~~-dap  159 (486)
T COG1492          82 SDTGSQVIVMGKDIGRKSAVEYYQEGKGLLWVAVKESLE-RLDREYDVVVIEGAGSPAEINLRDRDIANMGVAEIA-DAP  159 (486)
T ss_pred             CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHCCCEEEEECCCCHHHCCCCCCCCCCEEEEHHC-CCC
T ss_conf             888447999463446657178899988999999999998-754105589996379823227663661100220233-898


Q ss_pred             EEEEECCCCC-HHHHHHHHHHHHH-CCCCCHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEEECCCCHHHH
Q ss_conf             2674214431-1345666777640-0122114455442024587788665124776589999984797898827998999
Q gi|254780831|r  230 VVIVSTPQDL-ALIDVKRAISMYQ-KMNIPIIGMIENMSYFLASDTGKKYDLFGNGGARFEAEKIGIPFLESVPFDMDVR  307 (341)
Q Consensus       230 ~iiVttP~~~-s~~da~r~~~~~~-~~~~~i~GiV~NMs~~~~~~~~~~~~~fg~~~~~~~a~~~~i~~lg~IP~d~~i~  307 (341)
T Consensus       160 vILV~DIdRGGvfAsl~GT~~lL~~~~r~~VkG~iINk--FR----Gd~-~ll-~~gik~Le~~tg~~vlGv~P~~~~~~  231 (486)
T COG1492         160 VILVGDIDRGGVFASLYGTLALLPESDRALVKGFIINK--FR----GDE-SLL-DPGLKWLEELTGVPVLGVLPYLKDAL  231 (486)
T ss_pred             EEEEEEECCCCEEEEEEEHHEECCHHHHCCEEEEEEEE--EC----CCH-HHH-HHHHHHHHHHHCCEEEEECCCCCCCC
T ss_conf             89999511564541730212236876760014799963--17----987-887-45999999861974675652555455


Q ss_pred             H
Q ss_conf             7
Q gi|254780831|r  308 V  308 (341)
Q Consensus       308 ~  308 (341)
T Consensus       232 ~  232 (486)
T COG1492         232 R  232 (486)
T ss_pred             C
T ss_conf             7