HHsearch alignment for GI: 254780831 and conserved domain: KOG1534

Probab=93.79  E-value=0.09  Score=31.80  Aligned_cols=90  Identities=23%  Similarity=0.425  Sum_probs=52.2

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCC--CCCCCEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
Q ss_conf             46665425789999898723577506988224678--7653100024563112334457663223032233343552210
Q gi|254780831|r  102 SGKGGVGKSTTVVNIACALKNKGKNVAILDADVYG--PSIPKLLKISGKVEISDKKFLKPKENYGIKIMSMASLVDENVA  179 (341)
Q Consensus       102 SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~--ps~~~~lg~~~~~~~~~~~~i~p~~~~gi~~~s~g~l~~~~~~  179 (341)
T Consensus         9 ~GpAgSGKSTyC~~~~~h~e~~gRs~~vVNLDPAae~f~y~~~iDiRdlIsvdD--VmE-----dl-------~~GPNGg   74 (273)
T KOG1534           9 MGPAGSGKSTYCSSMYEHCETVGRSVHVVNLDPAAEHFNYPVTIDIRDLISVDD--VME-----DL-------DLGPNGG   74 (273)
T ss_pred             ECCCCCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHCCCCCCCHHHHCCHHH--HHH-----HH-------CCCCCCC
T ss_conf             746788843078999999986285458862687888608962002887521888--888-----86-------3499865


Q ss_pred             CCCCCCCHHHHHHHHHHHHCC-----CC--CCEEEEECCC
Q ss_conf             001342024789998675213-----77--7589974556
Q gi|254780831|r  180 MIWRGPMVQSAIMHMLHNVVW-----GQ--LDFLLIDMPP  212 (341)
Q Consensus       180 ~~~rg~~~~~~l~~~l~~~~w-----~~--~D~liiD~pp  212 (341)
T Consensus        75 L-------v~cmEyl~~NldwL~~~~Gd~eddylifDcPG  107 (273)
T KOG1534          75 L-------VYCMEYLLENLDWLEEEIGDVEDDYLIFDCPG  107 (273)
T ss_pred             C-------HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
T ss_conf             2-------03899999778887754067567779984798