HHsearch alignment for GI: 254780831 and conserved domain: PHA02519
>PHA02519 plasmid partition protein SopA; Reviewed.
Probab=99.85 E-value=2.6e-21 Score=162.02 Aligned_cols=211 Identities=20% Similarity=0.266 Sum_probs=128.7
Q ss_pred CCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE-CCCCCCCCCCEECCCCCCCCCCCC---------------CCC
Q ss_conf 4201024466654257899998987235775069882-246787653100024563112334---------------457
Q gi|254780831|r 95 KKFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILD-ADVYGPSIPKLLKISGKVEISDKK---------------FLK 158 (341)
Q Consensus 95 ~~iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liD-aDi~~ps~~~~lg~~~~~~~~~~~---------------~i~ 158 (341)
T Consensus 106 ~~VIAVaN~KGGVGKTTTavnLA~~LAl~G~RVL~ID~lDPQa-slS~~~G~~pd~~~~~~~t~~~~~~~~~~~~~~~I~ 184 (387)
T PHA02519 106 PVVLAVMSHKGGVYKTSSAVHTAQWLALQGHRVLLIEGNDPQG-TASMYHGYVPDLHIHADDTLLPFYLGERDNAEYAIK 184 (387)
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCC-CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHEE
T ss_conf 5289986168877699999999999997699689995988520-043145888876646554135776157555776033
Q ss_pred CCCCCCEEECCCCC-CCCCCCCC-----CCCCCCH-HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCEE
Q ss_conf 66322303223334-35522100-----0134202-47899986752137775899745564442100000002234026
Q gi|254780831|r 159 PKENYGIKIMSMAS-LVDENVAM-----IWRGPMV-QSAIMHMLHNVVWGQLDFLLIDMPPGTGDAHLTIAQKIPLSGVV 231 (341)
Q Consensus 159 p~~~~gi~~~s~g~-l~~~~~~~-----~~rg~~~-~~~l~~~l~~~~w~~~D~liiD~ppG~gd~~lsl~~~~~~~~~i 231 (341)
T Consensus 185 ~T~~~gLDlIPa~l~L~~~E~el~~~~~~~~~~~~~~~~L~~aL~~v-~d~YDvVlIDcPPsLG--~LTlNAL~AAd~vl 261 (387)
T PHA02519 185 PTCWPGLDIIPSCLALHRIETDLMQYHDAGKLPHPPHLMLRAAIESV-WDNYDIIVIDSAPNLG--TGTINVVCAADVIV 261 (387)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH-HCCCCEEEEECCCCHH--HHHHHHHHHCCEEE
T ss_conf 68989967974888999999999878743142234899999998752-3469989997997368--99999999829658
Q ss_pred EEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHH------HCCCCCCCCCCEEECCCCCHHHHH----HHHHCCCEE-EEC
Q ss_conf 742144311345666777640012211445544------202458778866512477658999----998479789-882
Q gi|254780831|r 232 IVSTPQDLALIDVKRAISMYQKMNIPIIGMIEN------MSYFLASDTGKKYDLFGNGGARFE----AEKIGIPFL-ESV 300 (341)
Q Consensus 232 iVttP~~~s~~da~r~~~~~~~~~~~i~GiV~N------Ms~~~~~~~~~~~~~fg~~~~~~~----a~~~~i~~l-g~I 300 (341)
T Consensus 262 IPv~p~~ld~~S~~qFl~m~~~l----~~~v~~~g~~~~~r~LiT-----r~ep~d~~q~~~m~~~lR~~fg~~vl~~~i 332 (387)
T PHA02519 262 VATPAELFDYVSVLQFFTMLLDL----LATVDLGGFEPVVRLLLT-----KYSLTVGNQSRWMEEQIRNTWGSMVLRQVV 332 (387)
T ss_pred ECCCCCHHHHHHHHHHHHHHHHH----HHHHHHCCCCCCEEEEEE-----CCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 68896387799999999999999----999862378750468775-----358999888999999999998788864623
Q ss_pred CCCHHHHHHHCCCCCEEE
Q ss_conf 799899975028821799
Q gi|254780831|r 301 PFDMDVRVLSDLGIPIVV 318 (341)
Q Consensus 301 P~d~~i~~a~~~g~P~v~ 318 (341)
T Consensus 333 ~~S~aI~~A~~~~qTlYE 350 (387)
T PHA02519 333 RVTDEVGKGQIKMRTVFE 350 (387)
T ss_pred HHHHHHHHHHHHCCCCEE
T ss_conf 587999973651274121