HHsearch alignment for GI: 254780831 and conserved domain: PRK00771

>PRK00771 signal recognition particle protein Srp54; Provisional.
Probab=98.11  E-value=7.5e-05  Score=52.31  Aligned_cols=43  Identities=30%  Similarity=0.521  Sum_probs=38.2

Q ss_pred             CCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
Q ss_conf             20102446665425789999898723577506988224678765
Q gi|254780831|r   96 KFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSI  139 (341)
Q Consensus        96 ~iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps~  139 (341)
T Consensus        98 ~Vim~v-GlqGsGKTTT~aKLA~~~kk~g~kv~lvaaDt~RpaA  140 (433)
T PRK00771         98 QTILLV-GLQGSGKTTTAAKLARYFQKKGLKVGVICADTWRPGA  140 (433)
T ss_pred             EEEEEE-CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHH
T ss_conf             589997-3788978999999999999779946785067883689