HHsearch alignment for GI: 254780831 and conserved domain: PRK06278
>PRK06278 cobyrinic acid a,c-diamide synthase; Validated.
Probab=96.74 E-value=0.009 Score=38.46 Aligned_cols=173 Identities=25% Similarity=0.350 Sum_probs=95.5
Q ss_pred CCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC-EE
Q ss_conf 22234654201024466654257899998987235775069882246787653100024563112334457663223-03
Q gi|254780831|r 88 QRNNLNVKKFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSIPKLLKISGKVEISDKKFLKPKENYG-IK 166 (341)
Q Consensus 88 ~~~~~~~~~iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps~~~~lg~~~~~~~~~~~~i~p~~~~g-i~ 166 (341)
T Consensus 237 ~~k~~~~kkgiiLl~TgS~SGKTFl~T~i~~kL~~k---vfv~--Ki-GpDvRDIV---PsLYll-r---E~M~ky~SIk 303 (482)
T PRK06278 237 RNKNPEVKKGIILLATGSESGKTFLSTSIVSKLRGK---TFVS--KI-GPDVRDIV---PSLYLL-R---EPMEKYSSIK 303 (482)
T ss_pred CCCCCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCC---EEEE--EC-CCCHHHCC---HHHHHC-C---CHHHHCCCEE
T ss_conf 047888996599984378777431167788875064---8998--60-88666525---246310-4---2122046168
Q ss_pred ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEE--CCCCCCC---C-CCHHHHCCCCCC--EEEEECCCC
Q ss_conf 2233343552210001342024789998675213777589974--5564442---1-000000022340--267421443
Q gi|254780831|r 167 IMSMASLVDENVAMIWRGPMVQSAIMHMLHNVVWGQLDFLLID--MPPGTGD---A-HLTIAQKIPLSG--VVIVSTPQD 238 (341)
Q Consensus 167 ~~s~g~l~~~~~~~~~rg~~~~~~l~~~l~~~~w~~~D~liiD--~ppG~gd---~-~lsl~~~~~~~~--~iiVttP~~ 238 (341)
T Consensus 304 I~~-------------rGW~~---~~efle~vk~sdYd~~iiEGVMgafTg~Ln~k~~YS~aeIak~lg~PvyivS~cnk 367 (482)
T PRK06278 304 ISD-------------RGWME---PSEFLEFVKNSDYDNYIIEGVMGAFTGALNKKNPYSGAEIAKALGFPVYIVSSCSK 367 (482)
T ss_pred ECC-------------CCCCC---HHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEECCCC
T ss_conf 546-------------78768---99999997347987899850478888875057887689999855998899942555
Q ss_pred C----HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEEE
Q ss_conf 1----134566677764001221144554420245877886651247765899999847978988
Q gi|254780831|r 239 L----ALIDVKRAISMYQKMNIPIIGMIENMSYFLASDTGKKYDLFGNGGARFEAEKIGIPFLES 299 (341)
Q Consensus 239 ~----s~~da~r~~~~~~~~~~~i~GiV~NMs~~~~~~~~~~~~~fg~~~~~~~a~~~~i~~lg~ 299 (341)
T Consensus 368 sGIEgAfve~~ay~slLk~~Gv~v~giILNKvY--------n~~ife--kvk~~~~~~~i~~~~V 422 (482)
T PRK06278 368 GGIEGAFVELMAYYSLLKEMGVNVAGIILNKVY--------NMEIFE--KVKKIASNLNINVIGV 422 (482)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC--------CHHHHH--HHHHHHHHCCCEEEEE
T ss_conf 660478999999999998669735889974112--------588999--9999998659529861