HHsearch alignment for GI: 254780831 and conserved domain: PRK06526
>PRK06526 transposase; Provisional.
Probab=93.89 E-value=0.053 Score=33.32 Aligned_cols=37 Identities=22% Similarity=0.316 Sum_probs=32.3
Q ss_pred CCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 420102446665425789999898723577506988224
Q gi|254780831|r 95 KKFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDAD 133 (341)
Q Consensus 95 ~~iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaD 133 (341)
T Consensus 99 ~Nvil--~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~ 135 (254)
T PRK06526 99 ENVVF--LGPPGTGKTHLAIGLGIRACQAGHRVLFATAA 135 (254)
T ss_pred CCEEE--ECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHH
T ss_conf 87899--89999868999999999999869967998779