HHsearch alignment for GI: 254780831 and conserved domain: PRK09183

>PRK09183 transposase/IS protein; Provisional.
Probab=93.63  E-value=0.064  Score=32.76  Aligned_cols=36  Identities=25%  Similarity=0.377  Sum_probs=31.7

Q ss_pred             CCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf             20102446665425789999898723577506988224
Q gi|254780831|r   96 KFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDAD  133 (341)
Q Consensus        96 ~iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaD  133 (341)
T Consensus       103 Nvil--~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~  138 (258)
T PRK09183        103 NIVL--LGPSGVGKTHLAIALGYEAVRAGIKVRFTTAA  138 (258)
T ss_pred             CEEE--ECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHH
T ss_conf             6799--89999868999999999999879939997899