HHsearch alignment for GI: 254780831 and conserved domain: PRK09302
>PRK09302 circadian clock protein KaiC; Reviewed.
Probab=90.46 E-value=0.3 Score=28.29 Aligned_cols=38 Identities=24% Similarity=0.350 Sum_probs=33.2
Q ss_pred CCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 20102446665425789999898723577506988224
Q gi|254780831|r 96 KFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDAD 133 (341)
Q Consensus 96 ~iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaD 133 (341)
T Consensus 266 GsstLi~Gp~GtGKTtla~qFl~~~a~~GE~~l~~~Fe 303 (501)
T PRK09302 266 GSIILVSGATGTGKTLLVSKFAEAACRRGERCLLFAFE 303 (501)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 94699988999888999999999998659908999996