HHsearch alignment for GI: 254780831 and conserved domain: PRK12377
>PRK12377 putative replication protein; Provisional.
Probab=95.23 E-value=0.018 Score=36.38 Aligned_cols=35 Identities=34% Similarity=0.466 Sum_probs=30.9
Q ss_pred ECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 02446665425789999898723577506988224
Q gi|254780831|r 99 AVASGKGGVGKSTTVVNIACALKNKGKNVAILDAD 133 (341)
Q Consensus 99 av~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaD 133 (341)
T Consensus 104 lIf~G~pGtGKTHLA~AIg~~a~~~G~sVlF~t~~ 138 (248)
T PRK12377 104 FVFSGKPGTGKNHLAAAIGNRLLAKGRSVIVVTVP 138 (248)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHH
T ss_conf 89989999878899999999999879969998899