HHsearch alignment for GI: 254780831 and conserved domain: PRK13185
>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional.
Probab=99.95 E-value=4.4e-27 Score=200.45 Aligned_cols=217 Identities=23% Similarity=0.292 Sum_probs=148.0
Q ss_pred CCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEECCCCCC--CCCC---C-----CCCCC-----
Q ss_conf 4201024466654257899998987235775069882246787653100024563--1123---3-----44576-----
Q gi|254780831|r 95 KKFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSIPKLLKISGKV--EISD---K-----KFLKP----- 159 (341)
Q Consensus 95 ~~iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps~~~~lg~~~~~--~~~~---~-----~~i~p----- 159 (341)
T Consensus 2 ~~~iaiy-GKGGIGKSTttaNlsaALA~~GkkV~~IgcDPk~DsT---~~L~g~~~~tild~l~~~~~~~~~~~~ed~~~ 77 (269)
T PRK13185 2 ALVLAVY-GKGGIGKSTTSSNLSAALAKLGKKVLQIGCDPKHDST---FTLTGKLVPTVIDILEEVDFHSEELRPEDFVF 77 (269)
T ss_pred CEEEEEE-CCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCH---HHCCCCCCCCHHHHHHHCCCCHHHCCHHHHHH
T ss_conf 5399997-8995478889999999999769938998189973230---11259987878999974387602125667763
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HCCCCCCEEEEECCCCCCCCCCHHHHCC-----CCCCEEEE
Q ss_conf 63223032233343552210001342024789998675-2137775899745564442100000002-----23402674
Q gi|254780831|r 160 KENYGIKIMSMASLVDENVAMIWRGPMVQSAIMHMLHN-VVWGQLDFLLIDMPPGTGDAHLTIAQKI-----PLSGVVIV 233 (341)
Q Consensus 160 ~~~~gi~~~s~g~l~~~~~~~~~rg~~~~~~l~~~l~~-~~w~~~D~liiD~ppG~gd~~lsl~~~~-----~~~~~iiV 233 (341)
T Consensus 78 ~G~~gv~cvEaGG-P~pG~GCaGrg--i~~~~~-~L~~~~~~~~~D~Vl~Dvlgd---Vv---CGGFa~Pi~~Ad~~~IV 147 (269)
T PRK13185 78 EGYNGVDCVEAGG-PPAGTGCGGYV--VGETVK-LLKEHHLLDDYDVILFDVLGD---VV---CGGFAAPLQYADYALIV 147 (269)
T ss_pred CCCCCCEEEECCC-CCCCCCCCCCC--HHHHHH-HHHHCCCCCCCCEEEEECCCC---CC---CCCCCCCHHCCCEEEEE
T ss_conf 3767705664389-99987767643--189999-998728743378799953674---33---36555751008889999
Q ss_pred ECCCCCHHHHHHHHHHHHH----CCCCCHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEEECCCCHHHHHH
Q ss_conf 2144311345666777640----012211445544202458778866512477658999998479789882799899975
Q gi|254780831|r 234 STPQDLALIDVKRAISMYQ----KMNIPIIGMIENMSYFLASDTGKKYDLFGNGGARFEAEKIGIPFLESVPFDMDVRVL 309 (341)
Q Consensus 234 ttP~~~s~~da~r~~~~~~----~~~~~i~GiV~NMs~~~~~~~~~~~~~fg~~~~~~~a~~~~i~~lg~IP~d~~i~~a 309 (341)
T Consensus 148 ts~e~~al~aAnnI~~~i~~~a~~~~~rl~GiI~Nr~-------~~------~d~v~~fa~~~g~~vl~~IP~~~~V~~s 214 (269)
T PRK13185 148 TANDFDSIFAANRIAAAIQAKAKNYKVRLAGVIANRS-------GG------TDQIDKFNERVGLRTLAHVPDLDAIRRS 214 (269)
T ss_pred ECCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC-------CC------HHHHHHHHHHHCCCEEEECCCCHHHHHH
T ss_conf 2530878999999999998653015853232576168-------83------7799999998699769978997889999
Q ss_pred HCCCCCEEEECCCCHHHH---HHHHHHHHHHH
Q ss_conf 028821799779998999---99999999999
Q gi|254780831|r 310 SDLGIPIVVHNMNSATSE---IYQEISDRIQQ 338 (341)
Q Consensus 310 ~~~g~P~v~~~p~s~~a~---~~~~iA~~i~~ 338 (341)
T Consensus 215 e~~g~TviE~~p~~~~a~v~~~Yr~LA~~i~~ 246 (269)
T PRK13185 215 RLKGKTLFEMEETDELEEVQNEYLRLADQLLA 246 (269)
T ss_pred HHCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf 87498678858998178999999999999982