HHsearch alignment for GI: 254780831 and conserved domain: TIGR01007
>TIGR01007 eps_fam capsular exopolysaccharide family; InterPro: IPR005702 This family describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis (EPS). At least 13 genes EpsA to EpsM in streptococcus species seem to direct the EPS proteins and share high homology. ; GO: 0030234 enzyme regulator activity, 0045227 capsule polysaccharide biosynthetic process.
Probab=99.91 E-value=1.2e-24 Score=184.20 Aligned_cols=160 Identities=21% Similarity=0.388 Sum_probs=129.2
Q ss_pred CCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEECCCCCC-CC--------CCCCCCCCCCC-CCE
Q ss_conf 201024466654257899998987235775069882246787653100024563-11--------23344576632-230
Q gi|254780831|r 96 KFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSIPKLLKISGKV-EI--------SDKKFLKPKEN-YGI 165 (341)
Q Consensus 96 ~iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps~~~~lg~~~~~-~~--------~~~~~i~p~~~-~gi 165 (341)
T Consensus 20 K~l~itS~~~~eGKsT~S~NiA~~fAqaGyKTLlIDgD~R~sv~~~~Fk~~n~~~GLtn~L~g~~dl~~~i~~T~isenL 99 (207)
T TIGR01007 20 KVLLITSVKAGEGKSTTSANIAVSFAQAGYKTLLIDGDMRNSVMSGTFKSQNKIKGLTNFLSGNTDLSDAICETNISENL 99 (207)
T ss_pred EEEEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCHHHHCCCCCHHHHHHCCCCCCCC
T ss_conf 58998411058886241078899998568558887546586603678658887656333221454533342026546787
Q ss_pred EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCC---CCCCHHHHCCCCCCEEEEECCCCCHHH
Q ss_conf 32233343552210001342024789998675213777589974556444---210000000223402674214431134
Q gi|254780831|r 166 KIMSMASLVDENVAMIWRGPMVQSAIMHMLHNVVWGQLDFLLIDMPPGTG---DAHLTIAQKIPLSGVVIVSTPQDLALI 242 (341)
Q Consensus 166 ~~~s~g~l~~~~~~~~~rg~~~~~~l~~~l~~~~w~~~D~liiD~ppG~g---d~~lsl~~~~~~~~~iiVttP~~~s~~ 242 (341)
T Consensus 100 ~vi~sG~vPPNPt~L-----L~s~~F~~l~e~~~-~~fD~iiiDTPP-ig~V~DAai-~a~--~~d~~~LV~~A~~~~k~ 169 (207)
T TIGR01007 100 DVITSGPVPPNPTEL-----LQSSNFKTLIETLR-KYFDYIIIDTPP-IGTVIDAAI-IAR--AVDASILVTDAGKIKKR 169 (207)
T ss_pred EEECCCCCCCCHHHH-----HHHHHHHHHHHHHH-CCCCEEEEEECC-CCHHHHHHH-HHH--HHCCEEEEEECCCCCHH
T ss_conf 275178878775478-----88899999999987-168889995188-666788999-998--72977988722532646
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 56667776400122114455442
Q gi|254780831|r 243 DVKRAISMYQKMNIPIIGMIENM 265 (341)
Q Consensus 243 da~r~~~~~~~~~~~i~GiV~NM 265 (341)
T Consensus 170 ~v~KAK~~LEq~G~~~LGvvLNK 192 (207)
T TIGR01007 170 EVKKAKEQLEQAGSKFLGVVLNK 192 (207)
T ss_pred HHHHHHHHHHHHCCCEEEEEECC
T ss_conf 78999999986178411588888