HHsearch alignment for GI: 254780831 and conserved domain: TIGR01007

>TIGR01007 eps_fam capsular exopolysaccharide family; InterPro: IPR005702 This family describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis (EPS). At least 13 genes EpsA to EpsM in streptococcus species seem to direct the EPS proteins and share high homology. ; GO: 0030234 enzyme regulator activity, 0045227 capsule polysaccharide biosynthetic process.
Probab=99.91  E-value=1.2e-24  Score=184.20  Aligned_cols=160  Identities=21%  Similarity=0.388  Sum_probs=129.2

Q ss_pred             CCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEECCCCCC-CC--------CCCCCCCCCCC-CCE
Q ss_conf             201024466654257899998987235775069882246787653100024563-11--------23344576632-230
Q gi|254780831|r   96 KFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSIPKLLKISGKV-EI--------SDKKFLKPKEN-YGI  165 (341)
Q Consensus        96 ~iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps~~~~lg~~~~~-~~--------~~~~~i~p~~~-~gi  165 (341)
T Consensus        20 K~l~itS~~~~eGKsT~S~NiA~~fAqaGyKTLlIDgD~R~sv~~~~Fk~~n~~~GLtn~L~g~~dl~~~i~~T~isenL   99 (207)
T TIGR01007        20 KVLLITSVKAGEGKSTTSANIAVSFAQAGYKTLLIDGDMRNSVMSGTFKSQNKIKGLTNFLSGNTDLSDAICETNISENL   99 (207)
T ss_pred             EEEEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCHHHHCCCCCHHHHHHCCCCCCCC
T ss_conf             58998411058886241078899998568558887546586603678658887656333221454533342026546787


Q ss_pred             EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCC---CCCCHHHHCCCCCCEEEEECCCCCHHH
Q ss_conf             32233343552210001342024789998675213777589974556444---210000000223402674214431134
Q gi|254780831|r  166 KIMSMASLVDENVAMIWRGPMVQSAIMHMLHNVVWGQLDFLLIDMPPGTG---DAHLTIAQKIPLSGVVIVSTPQDLALI  242 (341)
Q Consensus       166 ~~~s~g~l~~~~~~~~~rg~~~~~~l~~~l~~~~w~~~D~liiD~ppG~g---d~~lsl~~~~~~~~~iiVttP~~~s~~  242 (341)
T Consensus       100 ~vi~sG~vPPNPt~L-----L~s~~F~~l~e~~~-~~fD~iiiDTPP-ig~V~DAai-~a~--~~d~~~LV~~A~~~~k~  169 (207)
T TIGR01007       100 DVITSGPVPPNPTEL-----LQSSNFKTLIETLR-KYFDYIIIDTPP-IGTVIDAAI-IAR--AVDASILVTDAGKIKKR  169 (207)
T ss_pred             EEECCCCCCCCHHHH-----HHHHHHHHHHHHHH-CCCCEEEEEECC-CCHHHHHHH-HHH--HHCCEEEEEECCCCCHH
T ss_conf             275178878775478-----88899999999987-168889995188-666788999-998--72977988722532646


Q ss_pred             HHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf             56667776400122114455442
Q gi|254780831|r  243 DVKRAISMYQKMNIPIIGMIENM  265 (341)
Q Consensus       243 da~r~~~~~~~~~~~i~GiV~NM  265 (341)
T Consensus       170 ~v~KAK~~LEq~G~~~LGvvLNK  192 (207)
T TIGR01007       170 EVKKAKEQLEQAGSKFLGVVLNK  192 (207)
T ss_pred             HHHHHHHHHHHHCCCEEEEEECC
T ss_conf             78999999986178411588888