HHsearch alignment for GI: 254780831 and conserved domain: TIGR03371
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PMID:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=100.00 E-value=3.6e-36 Score=261.04 Aligned_cols=232 Identities=17% Similarity=0.161 Sum_probs=166.2
Q ss_pred CCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEECCCCCCCCC------CCCC---CCCCCCCCEE
Q ss_conf 201024466654257899998987235775069882246787653100024563112------3344---5766322303
Q gi|254780831|r 96 KFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSIPKLLKISGKVEIS------DKKF---LKPKENYGIK 166 (341)
Q Consensus 96 ~iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps~~~~lg~~~~~~~~------~~~~---i~p~~~~gi~ 166 (341)
T Consensus 2 kiIav~n~KGGVGKTT~avNLA~~La~~G~rVLlIDlDpQ~-~l~~~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (246)
T TIGR03371 2 KVIAIVGIKGGVGRTTLTAALASALKLLGEPVLAIDLDPQN-LLRLHFGMDWSVRDGWARALLAGEDWRAAAYRSSDGVL 80 (246)
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC-CHHHHCCCCCCCCCCHHHHHHCCCCHHHHHEECCCCEE
T ss_conf 39999759998549999999999999689978999759998-50322488875345699998279988895255789828
Q ss_pred ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCHHHHHHH
Q ss_conf 22333435522100013420247899986752137775899745564442100000002234026742144311345666
Q gi|254780831|r 167 IMSMASLVDENVAMIWRGPMVQSAIMHMLHNVVWGQLDFLLIDMPPGTGDAHLTIAQKIPLSGVVIVSTPQDLALIDVKR 246 (341)
Q Consensus 167 ~~s~g~l~~~~~~~~~rg~~~~~~l~~~l~~~~w~~~D~liiD~ppG~gd~~lsl~~~~~~~~~iiVttP~~~s~~da~r 246 (341)
T Consensus 81 ~ip~~~~~~~~~~~~~~-~-~~~~l~~~l~~l~~~~~D~viiD~pp~l~~~--~~~al~aad~vlipv~~~~~s~~~~~~ 156 (246)
T TIGR03371 81 FLPYGTLSADEREAYQA-H-DAGWLARLLQQLDLAARDWVLIDLPRGPSPI--TDQALAAADLVLVVVNADAACYATLHQ 156 (246)
T ss_pred EEECCCCCHHHHHHHCC-C-CHHHHHHHHHHHCCCCCCEEEEECCCCCCHH--HHHHHHHCCEEEEEECCCHHHHHHHHH
T ss_conf 97089847778987604-4-7899999998630367988999489987499--999999889479981899899999999
Q ss_pred HHHHHHCCCC--CHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEE-EECCCCHHHHHHHCCCCCEEEECCCC
Q ss_conf 7776400122--11445544202458778866512477658999998479789-88279989997502882179977999
Q gi|254780831|r 247 AISMYQKMNI--PIIGMIENMSYFLASDTGKKYDLFGNGGARFEAEKIGIPFL-ESVPFDMDVRVLSDLGIPIVVHNMNS 323 (341)
Q Consensus 247 ~~~~~~~~~~--~i~GiV~NMs~~~~~~~~~~~~~fg~~~~~~~a~~~~i~~l-g~IP~d~~i~~a~~~g~P~v~~~p~s 323 (341)
T Consensus 157 ~~~~~~~~~~~~~~~~iv~n~~-------~~~~~~-~~~~~~~l~~~~~~~~~~~~I~~~~~v~eA~~~g~pv~~~~p~S 228 (246)
T TIGR03371 157 LALALLARSVPPDGIHYLINQF-------QPARQL-SRDVRAVLRATLGSRLLPMFVHRDEAVAEALARGTPVFNYAPHS 228 (246)
T ss_pred HHHHHHHHCCCCCCEEEEEECC-------CCCCHH-HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCEEECCCC
T ss_conf 9999998427767517886302-------640158-99999999997498816226899779999997699826699589
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999983
Q gi|254780831|r 324 ATSEIYQEISDRIQQFF 340 (341)
Q Consensus 324 ~~a~~~~~iA~~i~~~l 340 (341)
T Consensus 229 ~aa~~y~~LA~~ll~~l 245 (246)
T TIGR03371 229 QAAHDIRTLAFWLLTKL 245 (246)
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 89999999999999963