HHsearch alignment for GI: 254780831 and conserved domain: TIGR03499

>TIGR03499 FlhF flagellar biosynthetic protein FlhF.
Probab=97.57  E-value=9.6e-05  Score=51.60  Aligned_cols=42  Identities=33%  Similarity=0.538  Sum_probs=34.9

Q ss_pred             CCCCEECCCCCCCCCHHHHHHHHHHHHCCC--CCEEEEEECCCCC
Q ss_conf             542010244666542578999989872357--7506988224678
Q gi|254780831|r   94 VKKFVAVASGKGGVGKSTTVVNIACALKNK--GKNVAILDADVYG  136 (341)
Q Consensus        94 ~~~iiav~SgKGGVGKSt~s~nLa~ala~~--G~~V~liDaDi~~  136 (341)
T Consensus       193 ~~~vi~lv-GPTGVGKTTTiAKLAa~~~l~~~~~~V~lIT~DtyR  236 (282)
T TIGR03499       193 QGGVIALV-GPTGVGKTTTLAKLAARFVLEHGKKKVALITTDTYR  236 (282)
T ss_pred             CCCEEEEE-CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
T ss_conf             67279997-788875788999999999997389967999807776