HHsearch alignment for GI: 254780831 and conserved domain: cd01120
>cd01120 RecA-like_NTPases RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H+ATPases, DnaB and related helicases as well as bacterial RecA and related eukaryotic and archaeal recombinases. This group also includes bacterial conjugation proteins and related DNA transfer proteins involved in type II and type IV secretion.
Probab=93.39 E-value=0.11 Score=31.33 Aligned_cols=38 Identities=29% Similarity=0.409 Sum_probs=32.1
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 102446665425789999898723577506988224678
Q gi|254780831|r 98 VAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYG 136 (341)
Q Consensus 98 iav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ 136 (341)
T Consensus 2 ~li~-g~~g~GKttl~~~~~~~~~~~~~~~~~~~~ee~~ 39 (165)
T cd01120 2 ILVF-GPTGSGKTTLALQLALNIATKGGKVVYVDIEEEI 39 (165)
T ss_pred EEEE-CCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCH
T ss_conf 8999-8999989999999999987639979999866644