HHsearch alignment for GI: 254780831 and conserved domain: cd01983
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=99.28 E-value=6.4e-12 Score=99.42 Aligned_cols=80 Identities=43% Similarity=0.731 Sum_probs=63.0
Q ss_pred CEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
Q ss_conf 01024466654257899998987235775069882246787653100024563112334457663223032233343552
Q gi|254780831|r 97 FVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSIPKLLKISGKVEISDKKFLKPKENYGIKIMSMASLVDE 176 (341)
Q Consensus 97 iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps~~~~lg~~~~~~~~~~~~i~p~~~~gi~~~s~g~l~~~ 176 (341)
T Consensus 1 ~i~~~-~~kGvGKTT~a~~La~~la~~g~~Vl~vD--------------------------------------------- 34 (99)
T cd01983 1 VIVVT-GKGGVGKTTLAANLAAALAKRGKRVLLID--------------------------------------------- 34 (99)
T ss_pred CEEEE-CCCCCCHHHHHHHHHHHHHHCCCEEEEEC---------------------------------------------
T ss_conf 98985-89977689999999999998899699986---------------------------------------------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCH-HHHCCCCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 21000134202478999867521377758997455644421000-00002234026742144311345666777
Q gi|254780831|r 177 NVAMIWRGPMVQSAIMHMLHNVVWGQLDFLLIDMPPGTGDAHLT-IAQKIPLSGVVIVSTPQDLALIDVKRAIS 249 (341)
Q Consensus 177 ~~~~~~rg~~~~~~l~~~l~~~~w~~~D~liiD~ppG~gd~~ls-l~~~~~~~~~iiVttP~~~s~~da~r~~~ 249 (341)
T Consensus 35 ---------------------------d~iiiD~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 81 (99)
T cd01983 35 ---------------------------DYVLIDTPPGLGLLVLLCLLALLAADLVIIVTTPEALAVLGARRLTE 81 (99)
T ss_pred ---------------------------CCEEECCCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHH
T ss_conf ---------------------------71788589988846899998787589589965984889999999999