HHsearch alignment for GI: 254780831 and conserved domain: cd02037
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=100.00 E-value=0 Score=415.11 Aligned_cols=169 Identities=59% Similarity=1.056 Sum_probs=165.7
Q ss_pred CEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
Q ss_conf 01024466654257899998987235775069882246787653100024563112334457663223032233343552
Q gi|254780831|r 97 FVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSIPKLLKISGKVEISDKKFLKPKENYGIKIMSMASLVDE 176 (341)
Q Consensus 97 iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps~~~~lg~~~~~~~~~~~~i~p~~~~gi~~~s~g~l~~~ 176 (341)
T Consensus 1 vi~v~s~kggvgkst~~~~la~~l~~~g~~v~~~d~di~gpsip~~---------------------------------- 46 (169)
T cd02037 1 VIAVMSGKGGVGKSTVAVNLALALAKLGYKVGLLDADIYGPSIPKM---------------------------------- 46 (169)
T ss_pred CEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEE----------------------------------
T ss_conf 9899749998819999999999999879978999713799975501----------------------------------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 21000134202478999867521377758997455644421000000022340267421443113456667776400122
Q gi|254780831|r 177 NVAMIWRGPMVQSAIMHMLHNVVWGQLDFLLIDMPPGTGDAHLTIAQKIPLSGVVIVSTPQDLALIDVKRAISMYQKMNI 256 (341)
Q Consensus 177 ~~~~~~rg~~~~~~l~~~l~~~~w~~~D~liiD~ppG~gd~~lsl~~~~~~~~~iiVttP~~~s~~da~r~~~~~~~~~~ 256 (341)
T Consensus 47 -----~rGp~~~~~i~q~l~~~~w~~lDyLIID~PPGtgD~~lt~~~~~~~d~~IvVTTP~~~s~~Da~r~i~~~~~~~i 121 (169)
T cd02037 47 -----WRGPMKMGAIKQFLTDVDWGELDYLVIDMPPGTGDEHLTLAQSLPIDGAVIVTTPQEVALDDVRKAIDMFKKVNI 121 (169)
T ss_pred -----EECHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCC
T ss_conf -----204738999999998525466788999689998707787987505674799946958899999999999997599
Q ss_pred CHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEEECCCCH
Q ss_conf 114455442024587788665124776589999984797898827998
Q gi|254780831|r 257 PIIGMIENMSYFLASDTGKKYDLFGNGGARFEAEKIGIPFLESVPFDM 304 (341)
Q Consensus 257 ~i~GiV~NMs~~~~~~~~~~~~~fg~~~~~~~a~~~~i~~lg~IP~d~ 304 (341)
T Consensus 122 ~i~GvVeNMs~~~c~~c~~~~~ifg~~~~~~la~~~~i~~Lg~IP~dp 169 (169)
T cd02037 122 PILGVVENMSYFVCPHCGKKIYIFGKGGGEKLAEELGVPLLGKIPLDP 169 (169)
T ss_pred CEEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEEECCCCC
T ss_conf 707999879666079999735278884499999995999898728999