HHsearch alignment for GI: 254780831 and conserved domain: pfam02606
>pfam02606 LpxK Tetraacyldisaccharide-1-P 4'-kinase. This family consists of tetraacyldisaccharide-1-P 4'-kinase also known as Lipid-A 4'-kinase or Lipid A biosynthesis protein LpxK, EC:2.7.1.130. This enzyme catalyses the reaction: ATP + 2,3-bis(3-hydroxytetradecanoyl)-D -glucosaminyl-(beta-D-1,6)-2,3-bis(3-hydroxytetradecanoyl)-D-glu cosam inyl beta-phosphate <= ADP + 2,3,2',3'-tetrakis(3-hydroxytetradecanoyl)-D- glucosaminyl-1,6-beta-D-glucosamine 1,4'-bisphosphate. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS). The family contains a P-loop motif at the N terminus.
Probab=93.21 E-value=0.073 Score=32.39 Aligned_cols=43 Identities=28% Similarity=0.512 Sum_probs=34.6
Q ss_pred CCEECCC-CCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
Q ss_conf 2010244-6665425789999898723577506988224678765
Q gi|254780831|r 96 KFVAVAS-GKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSI 139 (341)
Q Consensus 96 ~iiav~S-gKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps~ 139 (341)
T Consensus 36 pVI~VGNit~GGtGKTP~v~~l~~~l~~~g~~~~ilSRG-Yg~~~ 79 (318)
T pfam02606 36 PVIVVGNITVGGTGKTPLVIALAELLRARGLRPGVLSRG-YGGKS 79 (318)
T ss_pred CEEEECCEEECCCCHHHHHHHHHHHHHHCCCCEEEECCC-CCCCC
T ss_conf 999998984588785899999999999769944783267-67657