HHsearch alignment for GI: 254780831 and conserved domain: pfam06564
>pfam06564 YhjQ YhjQ protein. This family consists of several bacterial YhjQ proteins. The function of this family is unknown. However, the family does contain a P-loop sequence motif suggesting a nucleotide binding function.
Probab=99.97 E-value=2e-31 Score=229.46 Aligned_cols=227 Identities=15% Similarity=0.095 Sum_probs=144.4
Q ss_pred CCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEECCCCCC--CC----CCC----CCCCCCCCCCE
Q ss_conf 201024466654257899998987235775069882246787653100024563--11----233----44576632230
Q gi|254780831|r 96 KFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSIPKLLKISGKV--EI----SDK----KFLKPKENYGI 165 (341)
Q Consensus 96 ~iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps~~~~lg~~~~~--~~----~~~----~~i~p~~~~gi 165 (341)
T Consensus 2 kiIai~s~KGGVGKTT~t~nLa~aLa~~G~rVLlID~Dpq~-~l~~~~g~~~~~~~g~~~~~l~~~~~~~~~~~~-~~gl 79 (244)
T pfam06564 2 AVLALQGVRGGVGTTSLTAALGWALQQLGESVLVIDASPDN-LLRLHFNVDFDHSDGWARAELDGRPWRDAALRY-TPGL 79 (244)
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC-CCCCCCCCCCCCCCCHHHHHHCCCCHHHHHEEE-CCCE
T ss_conf 29999669998619999999999999779958999689874-210235888643441489987599777744452-6975
Q ss_pred EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-CCCCCCEEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCHHHHH
Q ss_conf 322333435522100013420247899986752-1377758997455644421000000022340267421443113456
Q gi|254780831|r 166 KIMSMASLVDENVAMIWRGPMVQSAIMHMLHNV-VWGQLDFLLIDMPPGTGDAHLTIAQKIPLSGVVIVSTPQDLALIDV 244 (341)
Q Consensus 166 ~~~s~g~l~~~~~~~~~rg~~~~~~l~~~l~~~-~w~~~D~liiD~ppG~gd~~lsl~~~~~~~~~iiVttP~~~s~~da 244 (341)
T Consensus 80 ~llP~g~l~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~yD~iliD~Pp~l~~--l~~~al~aad~vLv~v~~d~~s~~~- 156 (244)
T pfam06564 80 DLLPFGQLTGAERENLQQLQPDLGAWAQRLQLLKASGQYRWILLDLPQGFSP--LTRQLLELADVTLAVVHADANCHIR- 156 (244)
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHH--HHHHHHHHCCCEEEEECCCHHHHHH-
T ss_conf 8972899747899989865443799999876421357899999979999689--9999999769608996888589999-
Q ss_pred HHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCEEEECCCCH
Q ss_conf 66777640012211445544202458778866512477658999998479789882799899975028821799779998
Q gi|254780831|r 245 KRAISMYQKMNIPIIGMIENMSYFLASDTGKKYDLFGNGGARFEAEKIGIPFLESVPFDMDVRVLSDLGIPIVVHNMNSA 324 (341)
Q Consensus 245 ~r~~~~~~~~~~~i~GiV~NMs~~~~~~~~~~~~~fg~~~~~~~a~~~~i~~lg~IP~d~~i~~a~~~g~P~v~~~p~s~ 324 (341)
T Consensus 157 -----l~~~~~~~~~~ilvn~~--d-----~~~~l-~~d~~~~~~~~~~~~l~~~I~rd~~l~EA~a~g~pv~~yaP~S~ 223 (244)
T pfam06564 157 -----LHQQALPAGCHLLINDF--R-----IGSQL-QDDLYQLWLQSQRRLLPIVVHRDEAMAEALAAKQPLGEYRPDSL 223 (244)
T ss_pred -----HHHCCCCCCCEEEEECC--C-----HHHHH-HHHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCCHHHCCCCCH
T ss_conf -----73233446774886424--5-----57689-99999999986087257550798829899867995545386998
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999983
Q gi|254780831|r 325 TSEIYQEISDRIQQFF 340 (341)
Q Consensus 325 ~a~~~~~iA~~i~~~l 340 (341)
T Consensus 224 aA~dy~~LA~w~l~~~ 239 (244)
T pfam06564 224 AAEEVLTLANWCLLHY 239 (244)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999864