HHsearch alignment for GI: 254780832 and conserved domain: pfam01490

>pfam01490 Aa_trans Transmembrane amino acid transporter protein. This transmembrane region is found in many amino acid transporters including UNC-47 and MTR. UNC-47 encodes a vesicular amino butyric acid (GABA) transporter, (VGAT). UNC-47 is predicted to have 10 transmembrane domains. MTR is a N system amino acid transporter system protein involved in methyltryptophan resistance. Other members of this family include proline transporters and amino acid permeases.
Probab=93.28  E-value=0.53  Score=24.52  Aligned_cols=179  Identities=10%  Similarity=0.075  Sum_probs=76.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHH----HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             20488898999999999999988741078998138999999987267554257----78999999999650034699999
Q gi|254780832|r   58 VIGLVSLMIWVLTIVVTIKYILLLLRADNDGEGGILSLLALLLKKIPKRSTVL----IALGLAGSALFIGDSMVTPALSV  133 (628)
Q Consensus        58 v~G~lSli~Wtl~liv~vKYv~~~l~adn~GEGGi~aL~sl~~~~~~~~~~~~----~~~gligaa~ll~D~iLTpAISV  133 (628)
T Consensus        34 ~~g~i~l~~~~~~s~~t~~lL~~~~~~~~~~~~~~~sy~~l~~~~~G~~~~~~~~~~~~~~~~g~~~~---y~i~~~~~l  110 (405)
T pfam01490        34 IPGLILLLIVGLISLYTLHLLIRCSKYVDKKGKRRKSYGDLGYRLFGPKGKYIILFAQLLNLFGVCIV---YLIFAGDNL  110 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH
T ss_conf             99999999999999999999999998735589977689999999949649999999999999999999---999999999


Q ss_pred             HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCHHH
Q ss_conf             9987246642736676128999999999997500018999998--459999999999999998650187-4444679689
Q gi|254780832|r  134 LSAVEGVRYIAPELDNFIILIALGILVLLFMLQSHGTKGVACF--FSPIMVAWLLMITVSGLIHISDDW-GILAAFNPMY  210 (628)
Q Consensus       134 lSavegl~~~~P~l~~~~v~iai~il~~Lf~iq~rGt~~~g~~--F~pi~~lwf~~i~~~gi~~i~~~p-~vl~a~~P~~  210 (628)
T Consensus       111 ~~~~~~~~~~-~~-~~~~~~~~i~~~~~~pl~~~~~l~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (405)
T pfam01490       111 PAIFDSFFDD-CH-ISLVYFILIFGLIFIPLSFIPNLSALSILSLVAAVSSFYYIVILVVIVAELGVSTAQGVGLLGAST  188 (405)
T ss_pred             HHHHHHHCCC-CC-CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf             9999864788-77-660665389999999998505588999999999999999999999998750566787877667554


Q ss_pred             HHHHHHHCCHHHHHHHHHHHHHHHHH---HHHHCCCCCC
Q ss_conf             99999837435899998999985108---7874364546
Q gi|254780832|r  211 ALHMVFGKGTISLVVLGSVFLTITGA---EALYADLGHF  246 (628)
Q Consensus       211 ~~~~~~~~~~~g~~~lg~v~La~TG~---EAl~advghF  246 (628)
T Consensus       189 ~-----~~~~~~~~~~~~~~faf~~~~~~~~i~~~m~~p  222 (405)
T pfam01490       189 N-----IKLARLFLAIGIIVFAFEGHAVLLPIQNTMKSP  222 (405)
T ss_pred             C-----CCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
T ss_conf             3-----317789999999999962233479999874792