HHsearch alignment of GI: 254780832 and MMDB domain: 3gia_A_

Probab=99.58  E-value=5.7e-10  Score=82.11  Aligned_cols=362  Identities=11%  Similarity=0.031  Sum_probs=194.8

Q ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
Q ss_conf             99999988741078998138999999987267554257789999999996500346999999987246642736676128
Q gi|254780832|r   73 VTIKYILLLLRADNDGEGGILSLLALLLKKIPKRSTVLIALGLAGSALFIGDSMVTPALSVLSAVEGVRYIAPELDNFII  152 (628)
Q Consensus        73 v~vKYv~~~l~adn~GEGGi~aL~sl~~~~~~~~~~~~~~~gligaa~ll~D~iLTpAISVlSavegl~~~~P~l~~~~v  152 (628)
                      +..-|..+.  .....+||...-   ..+..++.      .|-..+-....++.+..+.......+.+....|.......
T Consensus        55 ~~~~~ael~--~~~p~~gg~~~~---~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (444)
T 3gia_A           55 VAYSYTKLG--AKIVSNAGPIAF---IHKAIGDN------IITGALSILLWMSYVISIALFAKGFAGYFLPLINAPINTF  123 (444)
T ss_dssp             HHHHHHHHH--TTCCCTTTHHHH---HHHHHCSS------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHH
T ss_pred             HHHHHHHHH--HHCCCCCCHHHH---HHHHHCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             999999999--964899709999---99995818------9999999999998877899999999987500023456653


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCCCCCC--CCCHHHHHHHHHHCCHHHHHHHH
Q ss_conf             99999999999750001899999845999999999999999865---01874444--67968999999837435899998
Q gi|254780832|r  153 LIALGILVLLFMLQSHGTKGVACFFSPIMVAWLLMITVSGLIHI---SDDWGILA--AFNPMYALHMVFGKGTISLVVLG  227 (628)
Q Consensus       153 ~iai~il~~Lf~iq~rGt~~~g~~F~pi~~lwf~~i~~~gi~~i---~~~p~vl~--a~~P~~~~~~~~~~~~~g~~~lg  227 (628)
                      ...+..+........+........+.-...+....+...+....   ........  ...|.....        .+.++.
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~  195 (444)
T 3gia_A          124 NIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYVIPDLAPSAVSG--------MIFASA  195 (444)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCGGGTSCCCSHHHHHH--------HHHHHH
T ss_pred             CHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCC--------CHHHHH
T ss_conf             324667666530204420125788888899998866278899761000025765432223455554--------123555


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCHHHHHHH--HHHHHHHHHHHHHHHH-HHHC-CHHH-H---HHH----HHHHCCCCHHHH
Q ss_conf             9999851087874364546711699999--9999999999974786-8735-9245-5---203----687278632899
Q gi|254780832|r  228 SVFLTITGAEALYADLGHFGRKPIQYAW--MVIFPALAINYLGQGA-LVLS-NPEA-I---KDP----FYMMFGGWFLPF  295 (628)
Q Consensus       228 ~v~La~TG~EAl~advghF~~~~i~~aw--~~v~~~L~l~y~Gq~a-~ll~-~~~~-~---~~~----f~~~~p~~~~~~  295 (628)
                      ..+-+.+|.|+..+-.+..++|.-+...  ..........|..-.. .... .++. .   .++    +....+++....
T Consensus       196 ~~~~~~~G~~~~~~~a~E~k~p~k~ip~a~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (444)
T 3gia_A          196 IFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLL  275 (444)
T ss_dssp             HGGGGGTHHHHHHTTGGGBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTGGGHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCCCHHHHHHCCCHHHHHHHHHHEEEEEEEEEHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHH
T ss_conf             43320233100000001110233321210001224530356688987603467233301222222111111223016888


Q ss_pred             HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf             99999999999603010025899999997599886568703887657110068999999998887773268889887899
Q gi|254780832|r  296 AVLTATCATVIASQAVITGTFSLARQAIHLGFLPRMKIFFTSETFKGQVFLPSINLFLFVGVLLFVIGFRHSESLVAAYG  375 (628)
Q Consensus       296 ~v~~at~a~iIaSqa~isg~Fsl~~qai~l~~~Pr~~i~~tS~~~~gqiYip~In~ll~ia~i~lvl~f~~s~~L~~aYg  375 (628)
                      +.+...++.+-..++...+.-+++....++|.+|+. +.+++++.    .  -.+......+++..+.+.+-+.+++++.
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~sR~l~a~ardg~lP~~-~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~  348 (444)
T 3gia_A          276 ISIGALFSISSAMNATIYGGANVAYSLAKDGELPEF-FERKVWFK----S--TEGLYITSALGVLFALLFNMEGVASITS  348 (444)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTHHHHHHHHHHSSCCSS-CCTTSCCS----C--THHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHH-HCCCCCCC----C--CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             776776630578999998866455435405915411-10147887----7--5146899999999999973999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999989999999998358569999999999999999999999985234869999999999999999899999999
Q gi|254780832|r  376 ISVSGTMVISTIMFSVFVHVCWKWKISKVIIFLFPLLSIEMTFLGANLFKVLDGGYTPLLIASLCIIVMWTWRRGTNLLS  455 (628)
Q Consensus       376 i~V~~tf~lTt~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~Kf~~GgW~~lli~~il~~iM~~W~~G~~~~~  455 (628)
                      ++......+......+..+++.+.++............+-+............--........+++.....|++.++...
T Consensus       349 ~~~~~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (444)
T 3gia_A          349 AVFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQWITNRFVFYGIIATFIGVLIFEIIYRKVTKRTFS  428 (444)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC
T ss_conf             99999999999999999885277888603899999999999999998615999999999999999999987403463267


Q ss_pred             HHHHH
Q ss_conf             98642
Q gi|254780832|r  456 TLTRH  460 (628)
Q Consensus       456 ~~~~~  460 (628)
                      +..++
T Consensus       429 ~~~~~  433 (444)
T 3gia_A          429 NNMYV  433 (444)
T ss_dssp             GGGTT
T ss_pred             CCCEE
T ss_conf             88443