HHsearch alignment for GI: 254780833 and conserved domain: COG4548
>COG4548 NorD Nitric oxide reductase activation protein [Inorganic ion transport and metabolism].
Probab=98.69 E-value=3.9e-07 Score=61.44 Aligned_cols=175 Identities=17% Similarity=0.184 Sum_probs=113.6
Q ss_pred CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCC----------CCCCCCCCEEEEEEEEEECCCCEEECCCCCCH
Q ss_conf 74069985276311566787214898999998750023----------35555311047987886367417816665587
Q gi|254780833|r 168 GLDMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDI----------IKSIPDVNNVVRSGLVTFSSKIVQTFPLAWGV 237 (371)
Q Consensus 168 ~idi~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~f~~~~~~~~~lt~~~ 237 (371)
T Consensus 446 Dla~TLLvD~S~St~a~mdetrRvidl~~eaL~~la~~~qa~gd~~~~~~fts~rr~~vri~tvk~FDe--------s~~ 517 (637)
T COG4548 446 DLAFTLLVDVSASTDAKMDETRRVIDLFHEALLVLAHGHQALGDSEDILDFTSRRRPWVRINTVKDFDE--------SMG 517 (637)
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHCCCHHHCCCCEEEEEEECCCC--------CCC
T ss_conf 614678762343367776522125787899999861326551788874372121376312311103430--------004
Q ss_pred HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCC-----CCHHHHHHHHHHH
Q ss_conf 89999974015688745642378899998742110123467776661699998404588888-----8978999999999
Q gi|254780833|r 238 QHIQEKINRLIFGSTTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYKKYIIFLTDGENSSPN-----IDNKESLFYCNEA 312 (371)
Q Consensus 238 ~~~~~~i~~l~~~g~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~ivl~TDG~~~~~~-----~~~~~~~~~c~~~ 312 (371)
T Consensus 518 ~~~~~RImALePg~ytR~G~AIR~As~kL~-----------~rpq~qklLivlSDGkPnd~d~YEgr~gIeDTr~AV~ea 586 (637)
T COG4548 518 ETVGPRIMALEPGYYTRDGAAIRHASAKLM-----------ERPQRQKLLIVLSDGKPNDFDHYEGRFGIEDTREAVIEA 586 (637)
T ss_pred CCCCHHHEECCCCCCCCCCHHHHHHHHHHH-----------CCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 553312213376644431099999999983-----------474112489994489854344323321115379999999
Q ss_pred HHCCCEEEEEEECCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 97898799999418642798998338980898289899999999999964
Q gi|254780833|r 313 KRRGAIVYAIGVQAEAADQFLKNCASPDRFYSVQNSRKLHDAFLRIGKEM 362 (371)
Q Consensus 313 k~~gi~i~tIg~~~~~~~~~l~~cAs~~~~y~~~~~~~L~~af~~I~~~i 362 (371)
T Consensus 587 Rk~Gi~VF~Vtld~ea~~y-~p~~fgqngYa~V~~v~~LP~~L~~lyrkL 635 (637)
T COG4548 587 RKSGIEVFNVTLDREAISY-LPALFGQNGYAFVERVAQLPGALPPLYRKL 635 (637)
T ss_pred HHCCCEEEEEEECCHHHHH-HHHHHCCCCEEECCCHHHCCHHHHHHHHHH
T ss_conf 8658347999833305555-288852674697024001605579999996