HHsearch alignment for GI: 254780833 and conserved domain: TIGR02877
>TIGR02877 spore_yhbH sporulation protein YhbH; InterPro: IPR014230 Proteins in this entry, typified by YhbH from Bacillus subtilis, are found in the genomes of nearly every endospore-forming bacterium, and in no other genomes. The gene in Bacillus subtilis was shown to be a member of the sigma-E regulon, with mutation leading to a sporulation defect ..
Probab=95.89 E-value=0.075 Score=29.51 Aligned_cols=115 Identities=16% Similarity=0.141 Sum_probs=67.2
Q ss_pred CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEECCCCCCHHHHHHHHHCCCC
Q ss_conf 06998527631156678721489899999875002335555311047987886367417816665587899999740156
Q gi|254780833|r 170 DMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDIIKSIPDVNNVVRSGLVTFSSKIVQTFPLAWGVQHIQEKINRLIF 249 (371)
Q Consensus 170 di~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~lt~~~~~~~~~i~~l~~ 249 (371)
T Consensus 216 Vvi~mMDtSGSMg~~-----kK-YiARSfFFw~~kFlr~KY~~---VeI~FisH~TeAkEV~Ee~--------F-F~kgE 277 (392)
T TIGR02877 216 VVIAMMDTSGSMGEF-----KK-YIARSFFFWMVKFLRTKYEN---VEIVFISHHTEAKEVTEEE--------F-FTKGE 277 (392)
T ss_pred EEEEEECCCCCCCCC-----HH-HHHHHHHHHHHHHHHHEEEE---EEEEEEEECCCCEEECHHH--------C-CCCCC
T ss_conf 777764478898873-----16-78888999999886320014---7899971045212401666--------0-13256
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHH-HHHHHHHH
Q ss_conf 8874564237889999874211012346777666169999840458888889789-99999999
Q gi|254780833|r 250 GSTTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYKKYIIFLTDGENSSPNIDNKE-SLFYCNEA 312 (371)
Q Consensus 250 ~g~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~ivl~TDG~~~~~~~~~~~-~~~~c~~~ 312 (371)
T Consensus 278 SGGT~~SS~Y~~ALeiI~~RYnP~~yN--------iY~FHfSDGDNl~~--Dn~Rlav~l~~~L 331 (392)
T TIGR02877 278 SGGTRCSSAYKLALEIIDERYNPARYN--------IYAFHFSDGDNLSS--DNERLAVKLVRKL 331 (392)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCC--------CCCCEEECCCCCCC--CCHHHHHHHHHHH
T ss_conf 677430167889999974278831006--------56535533778898--8646899999999