HHsearch alignment for GI: 254780833 and conserved domain: cd01451
>cd01451 vWA_Magnesium_chelatase Magnesium chelatase: Mg-chelatase catalyses the insertion of Mg into protoporphyrin IX (Proto). In chlorophyll biosynthesis, insertion of Mg2+ into protoporphyrin IX is catalysed by magnesium chelatase in an ATP-dependent reaction. Magnesium chelatase is a three sub-unit (BchI, BchD and BchH) enzyme with a novel arrangement of domains: the C-terminal helical domain is located behind the nucleotide binding site. The BchD domain contains a AAA domain at its N-terminus and a VWA domain at its C-terminus. The VWA domain has been speculated to be involved in mediating protein-protein interactions.
Probab=99.83 E-value=1.5e-18 Score=130.33 Aligned_cols=165 Identities=18% Similarity=0.278 Sum_probs=130.1
Q ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCCCCCCCCEEEEEEEEEEC-CCCEEECCCCCCHHHHHHHHHCCC
Q ss_conf 6998527631156678721489899999875002-33555531104798788636-741781666558789999974015
Q gi|254780833|r 171 MMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLD-IIKSIPDVNNVVRSGLVTFS-SKIVQTFPLAWGVQHIQEKINRLI 248 (371)
Q Consensus 171 i~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~f~-~~~~~~~~lt~~~~~~~~~i~~l~ 248 (371)
T Consensus 3 vvfvvD~SGSM~~~-----~rl~~aK~a~~~ll~d~~~~------~D~v~lv~F~g~~a~~~lppT~~~~~~~~~l~~L~ 71 (178)
T cd01451 3 VIFVVDASGSMAAR-----HRMAAAKGAVLSLLRDAYQR------RDKVALIAFRGTEAEVLLPPTRSVELAKRRLARLP 71 (178)
T ss_pred EEEEEECCCCCCCC-----CHHHHHHHHHHHHHHHHCCC------CCEEEEEEECCCCCEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999898788875-----67999999999999974346------78899999759755585688765799999872167
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHH-HHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 68874564237889999874211012346777666169999840458888889789-99999999978987999994186
Q gi|254780833|r 249 FGSTTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYKKYIIFLTDGENSSPNIDNKE-SLFYCNEAKRRGAIVYAIGVQAE 327 (371)
Q Consensus 249 ~~g~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~ivl~TDG~~~~~~~~~~~-~~~~c~~~k~~gi~i~tIg~~~~ 327 (371)
T Consensus 72 ~gG~T~l~~gL~~a~~~~~~~~--------~~~~~~~~iiLlTDG~~N~g~~~~~~~~~~~a~~~~~~gi~~~vId~~~~ 143 (178)
T cd01451 72 TGGGTPLAAGLLAAYELAAEQA--------RDPGQRPLIVVITDGRANVGPDPTADRALAAARKLRARGISALVIDTEGR 143 (178)
T ss_pred CCCCCCHHHHHHHHHHHHHHHC--------CCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 8898519999999999999850--------27898439999846986679995126999999999866997899979999
Q ss_pred C-CHHHHHHHC--CCCEEEEECCH--HHHHHH
Q ss_conf 4-279899833--89808982898--999999
Q gi|254780833|r 328 A-ADQFLKNCA--SPDRFYSVQNS--RKLHDA 354 (371)
Q Consensus 328 ~-~~~~l~~cA--s~~~~y~~~~~--~~L~~a 354 (371)
T Consensus 144 ~~~~~~~~~LA~~~~g~Y~~id~l~~~~i~~~ 175 (178)
T cd01451 144 PVRRGLAKDLARALGGQYVRLPDLSADAIASA 175 (178)
T ss_pred CCCHHHHHHHHHHCCCCEEECCCCCHHHHHHH
T ss_conf 76748999999942996998997998899998