>cd01473 vWA_CTRP CTRP for CS protein-TRAP-related protein: Adhesion of Plasmodium to host cells is an important phenomenon in parasite invasion and in malaria associated pathology.CTRP encodes a protein containing a putative signal sequence followed by a long extracellular region of 1990 amino acids, a transmembrane domain, and a short cytoplasmic segment. The extracellular region of CTRP contains two separated adhesive domains. The first domain contains six 210-amino acid-long homologous VWA domain repeats. The second domain contains seven repeats of 87-60 amino acids in length, which share similarities with the thrombospondin type 1 domain found in a variety of adhesive molecules. Finally, CTRP also contains consensus motifs found in the superfamily of haematopoietin receptors. The VWA domains in these proteins likely mediate protein-protein interactions.

Probab=99.78 E-value=7.9e-17 Score=119.94 Aligned_cols=178 Identities=20% Similarity=0.225 Sum_probs=130.3 Q ss_pred CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEECCCC----CCHHHHHHHH Q ss_conf 406998527631156678721489899999875002335555311047987886367417816665----5878999997 Q gi|254780833|r 169 LDMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDIIKSIPDVNNVVRSGLVTFSSKIVQTFPLA----WGVQHIQEKI 244 (371) Q Consensus 169 idi~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~lt----~~~~~~~~~i 244 (371) T Consensus 1 ~DivFllD~S~SIg~~nf-----~~~v~~F~~~lv~~f~---Ig~~~~rvgvv~yS~~~~~~~~f~~~~~~~k~~~l~~i 72 (192) T cd01473 1 YDLTLILDESASIGYSNW-----RKDVIPFTEKIINNLN---ISKDKVHVGILLFAEKNRDVVPFSDEERYDKNELLKKI 72 (192) T ss_pred CCEEEEEECCCCCCHHHH-----HHHHHHHHHHHHHHCC---CCCCCEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHH T ss_conf 978999938998666776-----9999999999998756---59896199999955887401323554434899999999 Q ss_pred HCCC----CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEE Q ss_conf 4015----688745642378899998742110123467776661699998404588888897899999999997898799 Q gi|254780833|r 245 NRLI----FGSTTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYKKYIIFLTDGENSSPNIDNKESLFYCNEAKRRGAIVY 320 (371) Q Consensus 245 ~~l~----~~g~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~ivl~TDG~~~~~~~~~~~~~~~c~~~k~~gi~i~ 320 (371) T Consensus 73 ~~l~~~~~~gg~T~tg~AL~~~~~~~~~~-------~g~R~~vpkv~IvlTDG~s~~~~~--~~~~~~a~~lr~~gV~i~ 143 (192) T cd01473 73 NDLKNSYRSGGETYIVEALKYGLKNYTKH-------GNRRKDAPKVTMLFTDGNDTSASK--KELQDISLLYKEENVKLL 143 (192) T ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHHCCC-------CCCCCCCCEEEEEEECCCCCCCCH--HHHHHHHHHHHHCCCEEE T ss_conf 99873146898247999999999986346-------788889974999995699887316--789999999998797899 Q ss_pred EEEECCCCCHHHHHHHCC-C--CE---EEEECCHHHHHHHHHHHHHHHHH Q ss_conf 999418642798998338-9--80---89828989999999999996400 Q gi|254780833|r 321 AIGVQAEAADQFLKNCAS-P--DR---FYSVQNSRKLHDAFLRIGKEMVK 364 (371) Q Consensus 321 tIg~~~~~~~~~l~~cAs-~--~~---~y~~~~~~~L~~af~~I~~~i~~ 364 (371) T Consensus 144 avGVg~-~~~~eL~~iag~~~~~~~c~~~~~~~fd~l~~i~~~l~~~vC~ 192 (192) T cd01473 144 VVGVGA-ASENKLKLLAGCDINNDNCPNVIKTEWNNLNGISKFLTDKICD 192 (192) T ss_pred EEEECC-CCHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCC T ss_conf 998063-7999999986999889977579947978999999999997249

HHsearch alignment for GI: 254780833 and conserved domain: cd01473