HHsearch alignment for GI: 254780833 and conserved domain: pfam06707
>pfam06707 DUF1194 Protein of unknown function (DUF1194). This family consists of several hypothetical Rhizobiales specific proteins of around 270 residues in length. The function of this family is unknown.
Probab=97.72 E-value=0.0031 Score=37.85 Aligned_cols=179 Identities=16% Similarity=0.225 Sum_probs=101.8
Q ss_pred CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC----CCCCEEEEEEEEEECC--CCEEECCCCC--CHHH
Q ss_conf 740699852763115667872148989999987500233555----5311047987886367--4178166655--8789
Q gi|254780833|r 168 GLDMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDIIKSI----PDVNNVVRSGLVTFSS--KIVQTFPLAW--GVQH 239 (371)
Q Consensus 168 ~idi~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~f~~--~~~~~~~lt~--~~~~ 239 (371)
T Consensus 3 dlaLvLavDvS~SVD~~------E~~lQr~G~A~Al~dp~V~~Ai~~g~~g~Iava~~eWsg~~~q~~vv~Wt~I~~~~d 76 (206)
T pfam06707 3 DLALVLAVDVSGSVDEE------EYRLQREGYAAALRDPEVLDALLSGPHGRIAVTYVEWSGPDDQRVVVPWTLIDSAED 76 (206)
T ss_pred HHHHHHHHHCCCCCCHH------HHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEECCEEECCHHH
T ss_conf 47786773323686999------999999999999759999999962899718999998027887448869989589999
Q ss_pred HHHHHHCC-----CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 99997401-----5688745642378899998742110123467776661699998404588888897899999999997
Q gi|254780833|r 240 IQEKINRL-----IFGSTTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYKKYIIFLTDGENSSPNIDNKESLFYCNEAKR 314 (371)
Q Consensus 240 ~~~~i~~l-----~~~g~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~ivl~TDG~~~~~~~~~~~~~~~c~~~k~ 314 (371)
T Consensus 77 a~a~A~~i~~~~r~~~~~Taig~Al~~a~~l~~~~~---------~~~~RrvIDiSGDG~nN~G~~p~---~~ard~~~~ 144 (206)
T pfam06707 77 AEAFAARLAAAPRRAGRRTAIGGALGFAAALLAQNP---------YECLRRVIDVSGDGPNNQGFPPV---TAARDAAVA 144 (206)
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC---------CCCCEEEEEEECCCCCCCCCCCH---HHHHHHHHH
T ss_conf 999999997588788999769999999999998299---------87617999960799888999813---789876777
Q ss_pred CCCEEEEEEECCCCC------HHHHHHHC--CCCEE-EEECCHHHHHHHH-HHHHHHHHH
Q ss_conf 898799999418642------79899833--89808-9828989999999-999996400
Q gi|254780833|r 315 RGAIVYAIGVQAEAA------DQFLKNCA--SPDRF-YSVQNSRKLHDAF-LRIGKEMVK 364 (371)
Q Consensus 315 ~gi~i~tIg~~~~~~------~~~l~~cA--s~~~~-y~~~~~~~L~~af-~~I~~~i~~ 364 (371)
T Consensus 145 ~GitINgL~I~~~~~~~~~~L~~yy~~~VIgGpgAFV~~a~~~~df~~AirrKL~rEIag 204 (206)
T pfam06707 145 AGVTINGLAIMGAEAPTSDDLDAYYRDCVIGGPGAFVEPANGFEDFAEAIRRKLVREIAG 204 (206)
T ss_pred CCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHC
T ss_conf 592896677747898762369999973202389844997388799999999999998732