HHsearch alignment for GI: 254780833 and conserved domain: pfam11775
>pfam11775 CobT_C Cobalamin biosynthesis protein CobT VWA domain. This family consists of several bacterial cobalamin biosynthesis (CobT) proteins. CobT is involved in the transformation of precorrin-3 into cobyrinic acid.
Probab=98.62 E-value=9.5e-07 Score=59.09 Aligned_cols=163 Identities=18% Similarity=0.207 Sum_probs=85.8
Q ss_pred CCEEEEECCCCCCCCCCCCCHHHHHHH---HHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEE-----------ECCC-
Q ss_conf 406998527631156678721489899---9998750023355553110479878863674178-----------1666-
Q gi|254780833|r 169 LDMMMVLDVSLSMNDHFGPGMDKLGVA---TRSIREMLDIIKSIPDVNNVVRSGLVTFSSKIVQ-----------TFPL- 233 (371)
Q Consensus 169 idi~~viD~SgSm~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~-----------~~~l- 233 (371)
T Consensus 13 t~VtlLID~SGSMrgr------~i~~Aa~~adiL~~~Ler~gv~~EI-----LGFtT~~wkGg~~r~~w~~~G~p~~pgR 81 (220)
T pfam11775 13 ACVQLLIDLSGSMGGR------KIQLAAACADIIADALDRCGVKNEI-----LGFTTFAWKGGPDREAMLAAGFPAFEAL 81 (220)
T ss_pred EEEEEEEECCCCCCCC------HHHHHHHHHHHHHHHHHHCCCCEEE-----EEECCCCCCCCCHHHHHHHCCCCCCCHH
T ss_conf 2899988688888988------6789999999999999876998799-----8540476577502999987599767236
Q ss_pred ----------CCCHH--HHHHHHHCCCCC---CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCC---
Q ss_conf ----------55878--999997401568---874564237889999874211012346777666169999840458---
Q gi|254780833|r 234 ----------AWGVQ--HIQEKINRLIFG---STTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYKKYIIFLTDGEN--- 295 (371)
Q Consensus 234 ----------t~~~~--~~~~~i~~l~~~---g~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~ivl~TDG~~--- 295 (371)
T Consensus 82 lndl~hiiyk~ad~~wrrar~~lg~m~~~gllkENiDGEAL~wA~~RL~~-----------R~e~RkILmViSDGaP~dd 150 (220)
T pfam11775 82 LLDIIHIINEKADAPEIRARKNLGCMCEEFLLKENIDGEALAQAAKLFAG-----------RMEDKKILLMISDGAPCDD 150 (220)
T ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC-----------CCCCCEEEEEECCCCCCCC
T ss_conf 65566421244688307789998777663144318971999999999863-----------9312469999758996776
Q ss_pred -----CCCCCCHHHHHHHHHHHH-HCCCEEEEEEECCCCCHHHHHHHCCCCEEEEECCHHHHHHHH-HHHH
Q ss_conf -----888889789999999999-789879999941864279899833898089828989999999-9999
Q gi|254780833|r 296 -----SSPNIDNKESLFYCNEAK-RRGAIVYAIGVQAEAADQFLKNCASPDRFYSVQNSRKLHDAF-LRIG 359 (371)
Q Consensus 296 -----~~~~~~~~~~~~~c~~~k-~~gi~i~tIg~~~~~~~~~l~~cAs~~~~y~~~~~~~L~~af-~~I~ 359 (371)
T Consensus 151 st~s~n~~~yL~~hLr~vi~~ie~~~~iel~aIGIghDv~r~yY~~------av~i~d~eeL~~~~~~~L~ 215 (220)
T pfam11775 151 STLSVAAGDGFEQHLRHIIEEIETLSEIDLIAIGIGHDAPRRYYKN------AALINDAEELGGAITEELA 215 (220)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHC------CEEECCHHHHHHHHHHHHH
T ss_conf 4112587776799999999998506882699987477768666506------5686038886599999999