HHsearch alignment for GI: 254780833 and conserved domain: smart00327
>smart00327 VWA von Willebrand factor (vWF) type A domain. VWA domains in extracellular eukaryotic proteins mediate adhesion via metal ion-dependent adhesion sites (MIDAS). Intracellular VWA domains and homologues in prokaryotes have recently been identified. The proposed VWA domains in integrin beta subunits have recently been substantiated using sequence-based methods.
Probab=99.79 E-value=3.6e-17 Score=122.04 Aligned_cols=158 Identities=28% Similarity=0.429 Sum_probs=124.3
Q ss_pred CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEECCC--CCCHHHHHHHHH
Q ss_conf 740699852763115667872148989999987500233555531104798788636741781666--558789999974
Q gi|254780833|r 168 GLDMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDIIKSIPDVNNVVRSGLVTFSSKIVQTFPL--AWGVQHIQEKIN 245 (371)
Q Consensus 168 ~idi~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~l--t~~~~~~~~~i~ 245 (371)
T Consensus 1 ~~di~~vvD~S~SM~~------~~~~~~k~~~~~~i~~l~~~~---~~~~v~vv~f~~~~~~~~~~~~~~~~~~~~~~i~ 71 (177)
T smart00327 1 PLDVVFLLDGSGSMGP------NRFEKAKEFVLKLVEQLDIGP---DGDRVGLVTFSDDATVLFPLNDSRSKDALLEALA 71 (177)
T ss_pred CCEEEEEEECCCCCCC------HHHHHHHHHHHHHHHHHHCCC---CCCEEEEEEECCCEEEEECCCCCCCHHHHHHHHH
T ss_conf 9489999928899882------899999999999999864179---9878999996372689976888689999999997
Q ss_pred CCCC--CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 0156--88745642378899998742110123467776661699998404588888897899999999997898799999
Q gi|254780833|r 246 RLIF--GSTTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYKKYIIFLTDGENSSPNIDNKESLFYCNEAKRRGAIVYAIG 323 (371)
Q Consensus 246 ~l~~--~g~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~ivl~TDG~~~~~~~~~~~~~~~c~~~k~~gi~i~tIg 323 (371)
T Consensus 72 ~l~~~~~g~t~~~~al~~a~~~~~~~~~~------~~~~~~~~iil~TDG~~~~~----~~~~~~~~~~~~~~v~i~~ig 141 (177)
T smart00327 72 SLSYKLGGGTNLGAALQYALENLFSKSAG------SRRGAPKVLILITDGESNDG----GDLLKAAKELKRSGVKVFVVG 141 (177)
T ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHHHCC------CCCCCCEEEEEEECCCCCCC----HHHHHHHHHHHHCCCEEEEEE
T ss_conf 14155788776428999999999766503------77887428999805887872----529999999986794899999
Q ss_pred ECCCCCHHHHHHHCC--CCEEEE
Q ss_conf 418642798998338--980898
Q gi|254780833|r 324 VQAEAADQFLKNCAS--PDRFYS 344 (371)
Q Consensus 324 ~~~~~~~~~l~~cAs--~~~~y~ 344 (371)
T Consensus 142 ~g~~~~~~~l~~ia~~~~~~~~~ 164 (177)
T smart00327 142 VGNDVDEEELKKLASAPGGVYVF 164 (177)
T ss_pred ECCCCCHHHHHHHHHCCCCEEEE
T ss_conf 58847999999998489965999