HHsearch results for GI: 254780833 and protein with PDBid: 1n3y_A
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=99.79 E-value=1.3e-18 Score=129.40 Aligned_cols=180 Identities=19% Similarity=0.276 Sum_probs=135.7
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEECCCCC--CHHHHHH
Q ss_conf 34674069985276311566787214898999998750023355553110479878863674178166655--8789999
Q gi|254780833|r 165 SDIGLDMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDIIKSIPDVNNVVRSGLVTFSSKIVQTFPLAW--GVQHIQE 242 (371)
Q Consensus 165 ~~~~idi~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~lt~--~~~~~~~ 242 (371)
.+.+.|++|++|.|+||.. +.....++++..+++.+.. ...|++++.|...+....+|+. +..++..
T Consensus 6 ~~~~~DivfvlD~S~Sm~~------~~~~~~k~~i~~li~~l~~-----~~~rv~vv~f~~~~~~~~~l~~~~~~~~~~~ 74 (198)
T 1n3y_A 6 SRQEQDIVFLIDGSGSISS------RNFATMMNFVRAVISQFQR-----PSTQFSLMQFSNKFQTHFTFEEFRRSSNPLS 74 (198)
T ss_dssp --CCEEEEEEEECCTTSCH------HHHHHHHHHHHHHHTTSCT-----TTEEEEEEEESSSEEEEECHHHHHHCSSGGG
T ss_pred CCCCCCEEEEEECCCCCCH------HHHHHHHHHHHHHHHHHCC-----CCCEEEEEEEECCEEEECCCCCCCCHHHHHH
T ss_conf 6888648999968799887------9999999999999997089-----9858999998343234126666433899999
Q ss_pred HHHCCC-CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 974015-6887456423788999987421101234677766616999984045888888978999999999978987999
Q gi|254780833|r 243 KINRLI-FGSTTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYKKYIIFLTDGENSSPNIDNKESLFYCNEAKRRGAIVYA 321 (371)
Q Consensus 243 ~i~~l~-~~g~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~ivl~TDG~~~~~~~~~~~~~~~c~~~k~~gi~i~t 321 (371)
.++.+. .+++|++..++.++.+.+.... ....+..+|++||+|||.+++..... ...++.+|+.||+||+
T Consensus 75 ~i~~~~~~~~~t~~~~al~~a~~~~~~~~------~~~r~~~~kvivlltDG~~~~~~~~~---~~~~~~~~~~gv~i~~ 145 (198)
T 1n3y_A 75 LLASVHQLQGFTYTATAIQNVVHRLFHAS------YGARRDAAKILIVITDGKKEGDSLDY---KDVIPMADAAGIIRYA 145 (198)
T ss_dssp GGTTCCCCCSCBCHHHHHHHHHTTTTSGG------GTCCTTSEEEEEEEESSCCBSCSSCH---HHHHHHHHHTTCEEEE
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHH------CCCCCCCCCEEEEEECCCCCCCCCCH---HHHHHHHHHCCCEEEE
T ss_conf 88765403698738899999999984232------05778764259999358988872059---9999999978988999
Q ss_pred EEECCC----CCHHHHHHHCCC---CEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf 994186----427989983389---8089828989999999999996400
Q gi|254780833|r 322 IGVQAE----AADQFLKNCASP---DRFYSVQNSRKLHDAFLRIGKEMVK 364 (371)
Q Consensus 322 Ig~~~~----~~~~~l~~cAs~---~~~y~~~~~~~L~~af~~I~~~i~~ 364 (371)
||++.. .+...|+.+|+. .++|.+++.++|.+.++.|.++|..
T Consensus 146 Ig~g~~~~~~~~~~~L~~ias~~~~~~~~~~~~~~~L~~i~~~l~~~ic~ 195 (198)
T 1n3y_A 146 IGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDALKDIQNQLKEKIFA 195 (198)
T ss_dssp EEESGGGGSSTTHHHHHHHSCSSSGGGEEEESSGGGGGGGHHHHHHHHHT
T ss_pred EEECCCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCC
T ss_conf 99787667753499999986699865199929999999999999987316