HHsearch results for GI: 254780833 and protein with PDBid: 1n3y_A

>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=99.79  E-value=1.3e-18  Score=129.40  Aligned_cols=180  Identities=19%  Similarity=0.276  Sum_probs=135.7

Q ss_pred             CCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEECCCCC--CHHHHHH
Q ss_conf             34674069985276311566787214898999998750023355553110479878863674178166655--8789999
Q gi|254780833|r  165 SDIGLDMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDIIKSIPDVNNVVRSGLVTFSSKIVQTFPLAW--GVQHIQE  242 (371)
Q Consensus       165 ~~~~idi~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~lt~--~~~~~~~  242 (371)
                      .+.+.|++|++|.|+||..      +.....++++..+++.+..     ...|++++.|...+....+|+.  +..++..
T Consensus         6 ~~~~~DivfvlD~S~Sm~~------~~~~~~k~~i~~li~~l~~-----~~~rv~vv~f~~~~~~~~~l~~~~~~~~~~~   74 (198)
T 1n3y_A            6 SRQEQDIVFLIDGSGSISS------RNFATMMNFVRAVISQFQR-----PSTQFSLMQFSNKFQTHFTFEEFRRSSNPLS   74 (198)
T ss_dssp             --CCEEEEEEEECCTTSCH------HHHHHHHHHHHHHHTTSCT-----TTEEEEEEEESSSEEEEECHHHHHHCSSGGG
T ss_pred             CCCCCCEEEEEECCCCCCH------HHHHHHHHHHHHHHHHHCC-----CCCEEEEEEEECCEEEECCCCCCCCHHHHHH
T ss_conf             6888648999968799887------9999999999999997089-----9858999998343234126666433899999


Q ss_pred             HHHCCC-CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf             974015-6887456423788999987421101234677766616999984045888888978999999999978987999
Q gi|254780833|r  243 KINRLI-FGSTTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYKKYIIFLTDGENSSPNIDNKESLFYCNEAKRRGAIVYA  321 (371)
Q Consensus       243 ~i~~l~-~~g~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~ivl~TDG~~~~~~~~~~~~~~~c~~~k~~gi~i~t  321 (371)
                      .++.+. .+++|++..++.++.+.+....      ....+..+|++||+|||.+++.....   ...++.+|+.||+||+
T Consensus        75 ~i~~~~~~~~~t~~~~al~~a~~~~~~~~------~~~r~~~~kvivlltDG~~~~~~~~~---~~~~~~~~~~gv~i~~  145 (198)
T 1n3y_A           75 LLASVHQLQGFTYTATAIQNVVHRLFHAS------YGARRDAAKILIVITDGKKEGDSLDY---KDVIPMADAAGIIRYA  145 (198)
T ss_dssp             GGTTCCCCCSCBCHHHHHHHHHTTTTSGG------GTCCTTSEEEEEEEESSCCBSCSSCH---HHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHCCCCCHHHHHHHHHHHHHHHHH------CCCCCCCCCEEEEEECCCCCCCCCCH---HHHHHHHHHCCCEEEE
T ss_conf             88765403698738899999999984232------05778764259999358988872059---9999999978988999


Q ss_pred             EEECCC----CCHHHHHHHCCC---CEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf             994186----427989983389---8089828989999999999996400
Q gi|254780833|r  322 IGVQAE----AADQFLKNCASP---DRFYSVQNSRKLHDAFLRIGKEMVK  364 (371)
Q Consensus       322 Ig~~~~----~~~~~l~~cAs~---~~~y~~~~~~~L~~af~~I~~~i~~  364 (371)
                      ||++..    .+...|+.+|+.   .++|.+++.++|.+.++.|.++|..
T Consensus       146 Ig~g~~~~~~~~~~~L~~ias~~~~~~~~~~~~~~~L~~i~~~l~~~ic~  195 (198)
T 1n3y_A          146 IGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDALKDIQNQLKEKIFA  195 (198)
T ss_dssp             EEESGGGGSSTTHHHHHHHSCSSSGGGEEEESSGGGGGGGHHHHHHHHHT
T ss_pred             EEECCCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCC
T ss_conf             99787667753499999986699865199929999999999999987316